Photobacterium gaetbulicola: H744_2c3105
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Entry
H744_2c3105 CDS
T03698
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pgb
Photobacterium gaetbulicola
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgb03400
]
H744_2c3105
DNA repair and recombination proteins [BR:
pgb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H744_2c3105
Archaeal homologous recombinant proteins
H744_2c3105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AJR09756
UniProt:
A0A0C5WDH6
LinkDB
All DBs
Position
2:complement(3490125..3491693)
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AA seq
522 aa
AA seq
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MGEHVAVLTQRMNPAKLLLILAATRGEAELFQLFFQLVRIEVDLAAEAIGKYVFKPHHGC
YKSLVVHLAVNLIALVGFCLKFSCSAAWAYRKVRYNPNKCFHNGISTAMKILHTSDWHLG
HQLHGYNRDFEHQAFLDWLAQTLEQEQVDALLVAGDIFDTANPPASAWRMLYRFLARMAK
SMPALNVVMIGGNHDSPSKLDAPHELLRAFDLHIVGGIHRLADGELDTERMLVPLTNKAG
EQAAWVLAVPFLRSADLRTEDLDEEDDRLIKGVETLYDEVTEAARQLQQPEQALIGMGHA
YMASGKLSEMSERRVLGGNQHALPASIFADDMAYVALGHLHLAQRVAKKEQVRYSGSPLP
LSMSERGYNHQVVLVELDGASVASIAPLSVPRAVDMLKVPSSPAPLEQVLEELKALDVDE
RPREEQPFLEVHIQLDTPQALLREKVLEALAGKAVRLAKITPHYLQQQAQNGLGQRRLSD
VTPQQVFSLSWSQKYQGEPDEAMAAAFESLLIAVEDSDAVES
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaacatgtcgccgtgcttacccagcgcatgaacccagccaaacttttgctgatc
ctggctgccacacggggtgaagcggaactcttccagctgtttttccagttggtcaggatt
gaggtcgatctcgcggctgaagcgataggtaagtacgtttttaaaccacatcatggctgt
tacaaatccttggttgtgcatttggctgtcaatcttattgcattggtcggcttttgtctt
aagttttcgtgctctgctgcttgggcataccgcaaagtgcggtacaatcctaacaagtgt
ttccataacggcatatcgaccgcaatgaagatcctccatacctcagactggcacctgggt
caccagctgcacggttataaccgcgatttcgagcaccaggcatttcttgattggctggcg
caaacccttgaacaagagcaggtcgacgccctgctggtggccggtgacatttttgatacc
gccaacccgccggcgagtgcctggcggatgctgtaccgtttcttggcccgaatggcgaaa
agtatgccggcgttgaatgtggtgatgatcggcggcaatcacgattcgccgagcaagctg
gatgccccgcatgaactgctcagggcattcgacctgcacatcgtcggtggcattcatcgt
cttgccgacggcgagctggataccgagcggatgctggtcccgctgaccaacaaggcgggt
gagcaagctgcctgggtactggcggtgccgttcctgcgcagtgctgatttgcgaactgaa
gatctggatgaagaagatgatcgcctgatcaaaggggtggagactttgtatgacgaggtg
accgaggcggcgcgccagcttcagcagccggaacaggcgttgattggcatgggccacgcc
tacatggcctcgggcaagctgtcggaaatgtccgagcgcagggtgctcggggggaaccag
cacgctttacctgcctcgatctttgccgatgatatggcatacgtggcgctgggccacctg
catttggcccagcgtgtggcgaagaaggaacaggtgcgttacagcggctcgccgctgccg
ctgtcgatgtctgagcggggatacaaccatcaggtggtattggtggagctcgatggcgca
tcggtcgccagcatcgcgccgctgtccgtgccgcgtgccgtcgatatgctcaaggtgcca
tcgtctccggcaccgctggagcaggtactcgaagagctcaaagcgctggatgtggatgag
cgtccgcgagaagagcagccgtttttggaggtgcatatccagctggatacaccgcaggcg
ctgctgcgggaaaaagtgctcgaagcgttggctggcaaggcggtcaggctggccaagatc
accccgcattacttgcagcaacaagcacagaatggcctgggacagcgccgtctttccgat
gttacgccgcagcaggtattcagtttgagctggagccagaagtatcagggcgaaccggat
gaggcgatggcggcggcttttgagagcttgctgattgccgtggaagatagcgacgctgtc
gagtcataa
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