Pseudomyrmex gracilis (graceful twig ant): 109853561
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Entry
109853561 CDS
T05003
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109853561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgc03041
]
109853561
Enzymes [BR:
pgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109853561
Spliceosome [BR:
pgc03041
]
Complex A
U2 snRNP components
U2 related factors
109853561
Complex B
109853561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
109853561
NCBI-ProteinID:
XP_020281378
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSGEPEKKRRRSRSRDRERDRDKGRHRERRSRSRDRDRD
RSDRRERSERDRDRERKRGDSKEKRLTGSKSSRSGKERSNRSRSRDRKDKEKGDNEELPF
DHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKTSILANLQLPMKKWS
LEDDSDEETPVVQNNNKEAKEEGVKEEVDEVKEEVKKDEEEEIDPLDAFMAEVQEEVRKV
NKLDSKAPKNNSTNSGTQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLH
ETAAGIANKQKRELAKVDHATTDYQPFRKSFYVEVPEIAKMTPEEVEAYKEELEGIRVKG
KGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTL
AFLLPMFRHILDQPPLADGDGPIAMIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTG
ISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVM
RIMENVRPDRQTVLFSATFPRQMEALARRILTKPVEVQVGGRSVVCKDVEQHVVVLEEDQ
KFYKLLEILGHYQDKGSAIVFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILD
FKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFIT
SEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFDESE
AALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPTATSITVPGQP
VPSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAA
KLNTKLNYQPREEDLVETDVETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYS
EAGLTVRGTYIAPGKTPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGAH
TASRGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaagtagcgacaaagatagacatcatcgacgaaggtcgagatcgagatctaga
tcacggtcaggcgaacctgaaaagaaacgacgacggtccaggagcagagatcgggagagg
gacagagacaagggccgacatagggaaaggaggagtcgttcgagagacagagatagagac
agaagtgatagaagggaacgttccgagagagacagggatcgcgagagaaaacgtggagac
agtaaagaaaagcgtcttacaggctcaaagtcttcgcgatctggcaaagaacgatcaaac
aggtctcggtctcgtgacagaaaagataaagagaagggcgacaatgaagagttgcctttt
gatcatacaaagttggacaaggaggaagaacagaaaaggttagagttggagatgcaaaag
aggagggaaaggatagaaagatggcgtgcagaaaggaagaaaaaagaactggaagcaaca
aaaaaagacggtaagacatctattttggcaaatcttcagctaccgatgaaaaagtggtcc
cttgaggatgatagtgacgaagagactcctgtggtacagaataacaacaaggaggcaaaa
gaagaaggtgtaaaggaagaggttgatgaggtaaaagaagaagtaaagaaagatgaagaa
gaagagatcgatccgcttgacgcttttatggctgaggtgcaagaagaagtgaggaaagtg
aataaactcgacagcaaagctccgaaaaataacagcacaaattctggaacgcaaagtggt
ggtgtagtcattgtaactggtgtggccaagaagaaagttcagaaacaaaagggtgaatta
attgagcagaatcaagatggattggaatattcaagcgaagaagaaggtgaaaatcttcac
gagaccgcagccggcatagcaaataaacaaaaacgagaattagccaaagtcgatcatgct
acaacagattatcaaccatttcgaaaatctttctatgttgaagttcctgaaattgcaaaa
atgacaccagaagaagtagaagcgtacaaggaagaattagaaggtattcgtgtaaagggt
aaaggttgcccgaagcctatcaagtcttgggcgcaatgcggcgtgaccaaaaaagaatta
gaggtgttaaagaaactcggttacgagaaaccgacgcctattcagtgtcaggcaatccca
gcgatcatgtcgggtcgcgatctgattggtatcgctaaaaccggtagcggtaaaacgctt
gcatttttgctaccaatgttccgtcatatactcgatcagccgccattggccgatggcgac
gggccgatcgcgatgatcatgacaccaactagagaattgtgcatgcaaatcggtcgggac
tcgaagaaattcaccaagtcgctaggtctttcgcatgtgtgcgtttatggtgggactggt
atttccgaacaaatagcagaactcaaaagaggagccgaaattattgtttgtacgccaggt
aggatgatcgacatgcttgccgccaacagcggacgagtgaccaatttacgtcgagtaaca
tatgtggtacttgacgaagccgaccgaatgttcgacatgggttttgaacctcaagtgatg
cgcatcatggagaatgtaagaccagatagacagactgtgttgtttagtgcgacatttcca
aggcagatggaagctttagccagaaggatactcacgaaaccggtcgaggtacaagttgga
ggacgttctgtcgtctgtaaggatgtcgaacaacatgtggtcgtacttgaagaagatcag
aagttctacaaattactcgagatcctcggacattatcaagataaaggatccgccattgtg
tttgtggataaacaggagaacgcagatacgttgctgaaagatcttatgaaagcatcatat
tcctgcatgtcgcttcatggcggtatagatcagtgcgacagagactcgaccatattggac
ttcaaagctggaagaacaaaactgctggtagctacgtcagttgctgcaagaggtttggat
gtcaagcatttggtattagtcgtcaattacgactgtccgaatcattatgaagattacgta
cacagatgtggcagaactggtcgagctggaaataaaggatatgcgtatacctttattacg
tccgagcaggaacgttatgccggcgatattctgcgtgcgcatgagttggcaggcgtaccg
gttccggaacccttacgtcagttatgggagggatataaagcccgtcaagctgcggacgga
aagaaagtacatacgggtggtggtttcagcggtaagggatttaaattcgatgaatcagaa
gctgctttggcaaacgagaaaaagaagttccagaaagcagctttaggattgcaagactcc
gacgatgaagacatcgaaaacgatatcgatcaacagatcgaaagcatgttggcgcctaaa
cgaacagttcgcgagatagctagaccgactgcgaccagcattacggtgccaggtcagcca
gttcctagtgccactgataaattggaattagccagaagattggcatcgaaaataaatata
gcgaagaatctcggcgccgaggcaaagggcgctactcagcaagcagcggaagccatactc
aagggtgcaggacctacaaatcttattacggcaaagacggtagcggaacaattagcagca
aagttgaatactaaattaaattatcagccgcgtgaagaagatctcgtagaaactgatgtg
gaaacgggcgaacaaacattccgcaagtatgaagaagagcttgaaatcaatgatttcccg
cagcaagcaagatggcgtgtcacaagcaaggaggctcttgctcagatttcggaatattct
gaagcgggtttgacggtaagaggaacatatatcgcgccaggaaaaactccgccagaagga
gagagaaaattatacttagcaatagaatcgacaagtgaattagcggtgagcaaagccaaa
gcggaggtgtcgcggctcattaaggaagaactcatcaagttacaagcatctggcgctcac
accgcttcgcgcggtcggtacaaggttttataa
DBGET
integrated database retrieval system
