Pseudomyrmex gracilis (graceful twig ant): 109856299
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Entry
109856299 CDS
T05003
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013
Nucleocytoplasmic transport
pgc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109856299
09122 Translation
03013 Nucleocytoplasmic transport
109856299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgc03019
]
109856299
03041 Spliceosome [BR:
pgc03041
]
109856299
Messenger RNA biogenesis [BR:
pgc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109856299
Spliceosome [BR:
pgc03041
]
Complex C
Other components
EJC/TREX
109856299
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109856299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
GNAT_acetyltr_2
Carbpep_Y_N
Motif
Other DBs
NCBI-GeneID:
109856299
NCBI-ProteinID:
XP_020287009
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MAMFEILRKNYSNYLRDYFKLSDVASFQKKCIECCANDGDRKAAVDQALRDTLLIVLTEN
SDNVSVLESYITFCIELCRKDLATASMPVMLLGDIFDSMTLDKCEELFIFVENNVNIWKE
DLFFTACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLEN
YTEFGSEAENDLEQITKDDDKSENKIPIDYNLYRKFWALQDFFRNPNQCYNKIHWKVFST
HASNVLSAFASFKLEEQRSYPTTYMKMDSSGEGSHKETHYFAKYLTNQKLLELQLSDSNF
RRYVLLQFLILFQYLNSTVKFKAETHELKSDQVEWVKTTTDQVYSLLTETPPDGPAFAET
VKNILKREEHWNAWKNEGCPPFKRPTSDTAEEEPRKPKRKRRIGDVIRDAQAIGKYHMGN
PELTKLWNLCPNNLEACKSKDRDFLPSLETYFEDAILELDPAAMVDDKYKKVNDGNFGWR
ALRLLARRSPHFFVHGNNPINKLPEYLETMIKKIAKDRPQVQSDIKSETEETTPPSESAD
QDFNEDVLKQDNEQVDSETTDIKTRKLNKVTPEMVVKLSESLKNDWKKLATKFGYTNEEI
AFFQSKPTPYEQCKNMLEIWAEEDEDASVENLAYILEGLNYTEALTVLKS
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtttgaaattctgagaaaaaattatagcaattacttgcgagattatttcaaa
ctatcagatgttgcatcatttcaaaagaaatgtattgaatgctgtgcaaatgatggcgac
agaaaagctgcagttgatcaggcactacgagatactctattgatagtgctaacagagaac
tcggacaatgtgagtgttctcgaatcttacatcacattttgcatagaattatgcaggaag
gatctagcaacagctagtatgccagtgatgttactgggtgacatttttgattctatgacg
cttgacaagtgtgaagaactgtttatctttgtggagaacaatgttaatatatggaaggaa
gatctattttttactgcttgcaaaaataatttattaagaatgtgtaatgacttgttgaga
agattgtcacgttcacaacaaactgtattttgtggcagaattttgctgtttctagcaaaa
ttctttcctttttctgaaaggtcaggtctgaatattgttagtgagttcaatttagaaaat
tacacagagtttggctctgaagcagaaaatgatctagaacaaataactaaagatgatgat
aagtcggaaaacaaaatacctattgattataatttatatagaaagttttgggctctacaa
gatttttttagaaatcccaatcaatgttataataaaattcactggaaagtattttcaact
catgcctctaatgtgctatcagcatttgcttctttcaaattggaggaacaacgaagttat
cctacaacatacatgaagatggattcctctggagaaggctctcataaagaaactcattac
tttgcaaaatatttgactaatcagaagttactggaactacaactatctgactctaatttt
aggcgatatgtactgctgcaatttctcattcttttccagtatttaaacagcactgttaaa
tttaaagctgagacacacgaactcaagtcggatcaagtggaatgggtgaagactaccaca
gatcaagtttactctctattaactgaaacgccacctgatggaccggcatttgcagagact
gtaaaaaatattttgaagcgcgaagaacattggaatgcatggaaaaacgaaggttgtcca
ccgtttaaaaggccgacgtcagataccgctgaagaagaaccgcgaaagccaaagagaaaa
cgaagaatcggtgatgttattagagatgcgcaagcaattggcaaatatcacatgggaaac
ccagaactcactaaattatggaatttgtgtcctaacaatcttgaggcttgcaaatctaaa
gatagagatttccttccgtccctagaaacgtatttcgaagatgccatattagaattggat
cctgccgcgatggtcgatgataaatacaagaaagtaaacgacggaaactttggttggaga
gcgttacgtttgttggcgagacgaagtccgcattttttcgttcacggtaacaatcccatt
aataaattgcctgaatatcttgaaacgatgattaagaagattgccaaagatcgccctcaa
gtacagtctgatataaagtcggaaactgaagaaacgacaccaccatcggaatctgctgat
caagatttcaatgaagatgttttgaagcaagataatgaacaggtagactctgagactacc
gatataaaaaccaggaaattgaataaagtcacaccggaaatggtagtgaaattatcggaa
agtctgaaaaatgattggaagaagttggcaacgaaatttggctatactaatgaagaaatt
gctttctttcaaagcaaaccaacaccatatgaacaatgtaagaatatgctcgagatatgg
gctgaagaagatgaggatgcgtcagtcgaaaatttagcttatatcttggaaggtttaaat
tacacggaagcgttaactgtgctcaaatcttaa
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