Pseudomyrmex gracilis (graceful twig ant): 109860229
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Entry
109860229 CDS
T05003
Name
(RefSeq) uncharacterized protein LOC109860229
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc04137
Mitophagy - animal
pgc04140
Autophagy - animal
pgc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109860229
04137 Mitophagy - animal
109860229
04148 Efferocytosis
109860229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgc03000
]
109860229
Transcription factors [BR:
pgc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109860229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
109860229
NCBI-ProteinID:
XP_020294756
LinkDB
All DBs
Position
Unknown
AA seq
1531 aa
AA seq
DB search
MNVRLHAAGHGGEVEETKGEEVLFFNSGCQQQQGRCADSYYGWIDKALDYASFDERNVTT
SRKELDFSLRELQTKPVHCDSATLSDKMANVLPGVNSASSFPIVTSSHTDDNGRSRVFDI
ETTSRLTARASSYAIGAGSCNVACNVTSALCNVAQTSANCNNSEAMSFCRDDGQPTVVVS
QEICPMIPKNCQLGPIDVEDLAMYFDSSTDNCSKPSSTTSGRANHFKKPRYGGPKEQSCQ
DRIVAPEGNLNDAYNLRPCDLTSSDLRNMEYSDSRACQIEYNNVLDLNDPRSRRDPGCHD
DPRLYDSPPRTCDLKFNYSRSCEFERRCDVLRRDVVGDTLGRNDPRPSGNWFCNNCPELF
EFCSEERWLQCPASDRCPLYHNNIYGTPVLPPCVYKNLHTGYDDSWHYGYPEDEQFLEDY
LSNEKRKERSRDAARCRRSRETDIFAELAAALPVAPEQAAHLDKASVMRLAIAYLKVRAV
VDSIPASLAKSESSAKLDELFPKALNGFMLVLSSDGNMVYLSENVSDYLGVSQMDMMGQS
VYEYSHPCDHDELRECLSVKPTDNSKKRACNFFLRLKCTLTSKGRKVNLKSASYKVIHCT
GRLTNIRDSNSNSIEVDDEEREKDDDSAEHDTGASLVLVGSPIPHPSNIEIPLGRHTFLS
KHSLSMKFTYADEKLAEYLGWDSEELVGQSVFEFHHALDNLALDKCFKCLFSKGQCETVA
YRFLNKRGGYVWVVTQATLIHCSKQQKPISVVCVNYVLSGVEHEDEVYSVRQLAARNIGD
ADLVKSEKSLPALVPTAVSTDASHVVLDDEENLAAKESVVVDEESVKNEDRPLAVTASIF
RSANGKVNCNNKNNGLRKNNNNNALPKPIQEKAFVQALKESLEESIKESLKENDEPATGD
RLEESRPSFATSFILQDKSAVERDSSDIADDQCHQDRPQAVTRQLFAPLVPAQQQQEQQL
SCRPPPQTATASIFAPRTEDMNKGFLTFSEDQPGLTMLKDEPEDLTHLAPTPGDVCVPLE
DTPFLSDMLDEFIFGNDTYSCPLLSPGDSLTPELRSADLSESLKDTDLADTTRTKNAADR
LADSDPFMYGDSPGSPCGIDTSSVSPSLSKYRQSPDRSVDSLDSPTAGSGDGLSEDEMLM
LGISDNIGDDELALRAPYIPMSDQDEALDLLISNDMAMWDTSQSSDKGSSKWLLEDREQH
SSESSLAQLLRTDQAVSRRYNDHGGGLVTSPQAFGQTPKKNLEQRSFESDRWSSNQERND
RPSKRIHSGLNADSGSEHKRIKCEDSLFQRINLEDTLSRQQRMSILNKKSSLNHDSNNSS
QLLRRLVTSQIPSVVASSSSNTGTSGEHRRDVLQQHIRVLDDIIDLAGTEGDRGGGGGGG
GNHDGESDGFNKIDVTSRGRTPICGGSSVLMNLLVSGCDDPLINSRNVPTLLPKSLTTPL
TVNVDNQMVPQSTNARNVLSLPDHLSPDTRKHLIGLFTGGGGNGGGGGSSGTTPIVSPTS
VVSFDSLDYGGSDLLQMESDLLEGVLDRTLV
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcgtttgcacgcagcgggacatggcggggaagtggaggaaacgaagggagaa
gaagttctcttcttcaacagcggttgtcagcagcaacagggtcgttgcgcggattcgtat
tacggttggatcgacaaggcgttggattacgcgagttttgacgagcgtaatgtgacgacg
agtcgaaaagaacttgatttttcgttgcgcgaattgcagacgaagccggtgcactgcgat
tcggcgaccttatccgacaagatggcgaacgtcttgcccggagtcaatagcgcctcgtcc
tttcccatcgttacgtcatcgcacaccgacgataacggcagatcgcgagttttcgacatc
gaaacgacatctcgcttgacggcgagagcctcgtcgtatgcaatcggtgcgggcagttgc
aacgtagcgtgcaacgttacgtcagcgttgtgcaatgttgcccaaacgagcgccaactgc
aacaattcggaagcgatgtcgttctgtcgcgacgacggccaaccgacggtcgtcgtttcg
caggaaatctgcccgatgataccgaagaattgtcagttgggcccgatcgacgtcgaggat
ctcgcgatgtacttcgactcgtcgacggataactgcagtaagccgtcctcgacgacgagc
ggtcgcgcgaatcattttaagaaaccgagatacggtggaccgaaggagcaatcgtgtcaa
gatcgtattgtggcgccggaaggcaatctgaacgatgcttataatttgcgtccttgcgat
ctaacatcgagcgacttgcgaaacatggaatattccgactcccgtgcttgtcaaatagaa
tacaacaacgttttggatctcaacgatccgcgatcccgccgcgatccaggctgtcacgac
gatccgcgactgtacgattcgccgccgcgaacgtgcgatctgaaattcaattattcgcga
tcctgcgagttcgaacgtcgctgcgacgttctccgtcgcgatgtggttggagatactctc
ggacggaatgatccgagaccgagcggcaattggttctgcaacaactgtccggaattgttc
gaattttgcagcgaagaacggtggctgcagtgcccggcgagcgatcgctgtcccctttac
cacaacaatatttacggcacacctgttctaccaccgtgtgtgtacaagaatctgcacact
ggctacgacgatagctggcattacggctatccggaagacgaacaatttctcgaagattac
ctgagcaatgaaaagaggaaggagagatctcgcgatgcggcgcgttgcagacgcagcaga
gagaccgatatttttgccgagcttgcagccgcgcttccggttgcgccggaacaagcagcg
cacttagataaggccagcgtaatgagactggcgattgcctacctcaaagttcgagccgtc
gtagactccattccagcctcgctggcgaaatccgagtcctcggcaaaactggatgaatta
tttccgaaagctctcaatggctttatgttagtactctccagtgacggcaatatggtttac
ctctcggagaatgtcagcgattatctcggagtgtcacaaatggacatgatgggacaaagt
gtgtatgaatatagccacccttgcgatcatgacgaattgcgcgagtgcctctccgtgaag
cctacagataatagtaagaaacgtgcctgcaactttttcctgcggctcaagtgtaccctc
accagcaaaggcaggaaggtcaatttgaagagcgcctcttacaaggtgattcactgtacc
ggcagattgacaaacattcgcgactcgaactcaaattctatagaggttgatgacgaagaa
cgtgagaaagatgatgattccgctgaacacgacacaggtgcttctttagtgctcgtgggt
agtcccataccccatccgagtaacatcgaaatacctctgggacgccataccttcttatcg
aagcacagtctcagtatgaaattcacctacgccgacgagaaactggccgaatatctgggc
tgggacagtgaagaactggtgggtcaatcggtcttcgagttccatcacgcgctcgacaat
ctggcactagacaagtgcttcaaatgtctattcagcaagggccaatgcgagaccgtggca
tatagattcctgaacaaacggggcggttacgtctgggtcgtcacgcaggccaccctcatc
cactgctccaagcagcagaaaccgatctccgttgtctgcgtcaactacgttctaagtggg
gtcgagcatgaggacgaggtgtacagcgtgcgccagcttgccgcgcgcaacatcggcgac
gccgatctggtgaagtcggagaaatcgttgccggccctggtgccgaccgccgtgtcgacc
gacgcgagtcacgtggtgctggacgacgaggagaacctagccgcgaaagagtcggtggtc
gttgacgaggaatccgtcaagaacgaggaccgaccgcttgccgtcactgcgtccatattc
cgctcggccaacggaaaagtcaattgcaacaacaagaacaacggattgcgcaaaaataat
aataataacgcgttaccgaaaccgattcaagagaaggcgttcgtccaggctctcaaggaa
tccctcgaggaatccatcaaggagtcgctgaaggagaacgacgagccggccacgggagat
cgactggaggaatcccggccgtcgttcgcgacgtcctttatactgcaggacaaatcggca
gtcgagcgcgattcctcagacattgccgacgaccagtgtcatcaagatcgtccgcaagcg
gtcacaagacaactgttcgcgccgctcgtgcccgcgcagcaacaacaggaacaacaattg
tcgtgtcgcccgcctccacagacggccacagcgagcatcttcgcgcctcgtaccgaggac
atgaacaaaggcttcttgactttcagcgaggatcagccggggctcacaatgttgaaagac
gagccggaagatctgacacacctcgcgcccacacccggagacgtgtgcgtgcccctggaa
gacacacctttcctgtcggatatgctagacgagtttatcttcggtaacgacacctacagc
tgccccttgctgagtccgggtgacagtttaaccccggaactgcgttccgcagacctatca
gagtctcttaaagacacagacctagcagacacaaccagaactaaaaatgcggccgatcgt
ttggccgacagtgatccttttatgtacggagattcgcccggaagtccatgcggtattgac
acgagcagcgtatcgccgtctttatcaaaatatcgacagagtcctgatcgaagtgtggac
tcgctggacagtcctacagcgggcagcggtgacggactctccgaggacgagatgctcatg
ttgggcatcagcgacaatataggagacgacgaactggcacttagagcgccttatattccg
atgtcagatcaggacgaggcgttggatctgctcatcagtaacgacatggccatgtgggat
acgtcacagtcttccgacaagggatcatcgaagtggttactcgaagatcgtgagcagcat
tcgtctgaatccagtttggcgcaattactgcggactgatcaagcggtgtcgcgacgatac
aacgatcacggcggaggtctggtgacctcgcctcaggccttcggacagacaccgaagaaa
aatcttgagcagcgatccttcgagtccgatcgatggtcctccaatcaggaacgtaacgat
cgtccaagcaaacgcattcattccgggctcaacgcggattccgggagcgagcacaaacgt
atcaaatgcgaagattcgcttttccagcgcattaatctcgaagatacgctgtcgagacag
cagcgtatgtcgattcttaacaagaaatcgtcgttaaatcacgacagtaataacagcagc
cagcttctacgtcgtctcgtaacatcccaaataccgagcgtcgtcgcatcgtcttcgtcc
aatacgggcacttccggcgaacatcgtcgcgatgtcttgcagcagcacattcgcgttctc
gacgacattatcgacctcgccgggacggagggcgaccgtggcggaggaggaggtggtggc
ggaaatcacgacggcgaaagcgacggcttcaacaagatagacgtgacgagccgtggccga
actccaatctgcggcggcagcagcgtgttaatgaatctcctggtttccggctgcgatgat
cctctgataaattctcgcaatgtgccgaccttgctgccgaagagcctaacaaccccgttg
accgtcaacgtggacaaccagatggtaccgcaatctacgaacgcccgcaacgtactgtct
ctgcctgatcatctcagtccggacacgagaaaacatttgataggtctctttaccggcggc
ggtggcaacggcggcggcggcggtagcagcggaacaacccccatagtctcgcccacatcc
gttgtgagcttcgacagcctcgattacggcggttccgatctgttgcaaatggaatcggat
ctgctcgaaggcgtgttggaccgaactttggtgtga
DBGET
integrated database retrieval system
