Phaeobacter gallaeciensis DSM 26640: Gal_04389
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Entry
Gal_04389 CDS
T02968
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pgd
Phaeobacter gallaeciensis DSM 26640
Pathway
pgd00521
Streptomycin biosynthesis
pgd00523
Polyketide sugar unit biosynthesis
pgd00541
O-Antigen nucleotide sugar biosynthesis
pgd01100
Metabolic pathways
pgd01110
Biosynthesis of secondary metabolites
pgd01250
Biosynthesis of nucleotide sugars
Module
pgd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Gal_04389
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Gal_04389
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Gal_04389
Enzymes [BR:
pgd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Gal_04389
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Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AHD12093
UniProt:
V9WPN2
LinkDB
All DBs
Position
pGal_F69:34088..34642
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AA seq
184 aa
AA seq
DB search
MQIEDTGLPGVKVLTPARFGDARGFFSECWNRARMAEAGLDFDFVQDNHSLSMEVGTLRG
LHFQAPPHAQAKLVRCGQGALFDVAVDIRKGSPTYGQWFGIELSAQNGKQLLIPAGFLHG
FITRAPGTEVLYKCNDYYAPDCDGGVVWDSCGIEWGFDGTPVLSDKDTRAPRFEDFNSPF
VWEG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgaagacacgggcttgccaggggtgaaggtgctgacaccggcgcggtttggc
gatgcgcgggggttcttctccgaatgctggaaccgggcgcggatggccgaggcggggctg
gatttcgatttcgtgcaggacaatcattcgctgtcgatggaggtgggcaccctgcgcggg
ctgcattttcaggcgccaccccatgcccaggccaagctggtgcgctgtggtcagggggcg
ctgtttgatgtggcggtggatattcgcaaagggtcacccacatatggtcagtggtttggt
atcgaactcagtgcacagaacggcaagcagctgttgatcccggcggggttcctgcatggc
ttcatcacccgcgcgccgggcaccgaagttctgtataaatgcaatgattactacgcgccg
gactgtgatggcggggtggtctgggacagctgcggcatcgagtggggctttgacggcacg
ccggtgctgtcggacaaggataccagagcgccccggtttgaagacttcaacagccccttc
gtgtgggaaggataa
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