Pluralibacter gergoviae: LG71_20925
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Entry
LG71_20925 CDS
T03300
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pge
Pluralibacter gergoviae
Pathway
pge03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LG71_20925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pge03400
]
LG71_20925
DNA repair and recombination proteins [BR:
pge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LG71_20925
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LG71_20925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SBDS_domain_II
UB2H
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIR02213
LinkDB
All DBs
Position
complement(4471047..4473068)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKTFKLHSAFRPSGDQPDAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRSILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTIQR
FTVYPKTHYVTPRERILQAMEEIKQELVGRRKTLMDNNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGDEVVDQVVRPTGLLD
PVIEVRPVATQVDDLLSEIRARAQINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQAYNEEHGIVPQGLNKKVVDILALG
EGLAKTRAKGRSRSKSTGQSEAAELGLTPKALEQKIHALEAQMMQHARDLEFEEAAHVRD
QLQQLRQLFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacgttcaaactgcattccgctttccgcccctccggcgatcagcccgatgcc
atccggcgtcttgaagaggggctggaggatggtctggcccatcagacgctgctcggggtg
accggttccgggaaaaccttcactatcgccaacgtcattgccgacctgcagcggccgacg
atggtgctggcgccgaacaaaaccctggcggcgcagctctacggcgagatgaaagagttc
ttccccgaaaacgcggtggagtacttcgtctcttactacgactactatcagccggaggcc
tacgtccccagttcggatacctttatcgagaaagacgcctcggttaacgagcacatcgag
cagatgcgcctgtcggccacaaaggcgctgcttgagcggcgcgacgttatcgtggtcgcc
tcggtgtccgccatctacggtctcggcgatccggatctctatctcaagatgatgctgcac
ctgacggtcggcatgctgattgaccagcgctcgatcctgcggcggctggcggagctgcag
tacgcccgcaacgatcaggccttccagcgcggcaccttccgggtacgcggcgaagtgatc
gacatcttcccggcggagtccgacgacatcgccctgcgcgttgagctgtttgacgaggag
gtggagcggctgtcgctgtttgatccgctgaccggccaggttgagtccacaatccagcgc
tttaccgtttatcctaagacccactacgtcaccccgcgcgagcgtatcctgcaggcgatg
gaggagatcaaacaggagctggtggggcggcgcaaaacgctgatggacaacaacaagctg
ctggaagagcagcgcctgacccagcgcacccagtttgacctggagatgatgaatgagctg
ggctactgctccggcatcgaaaactactcccgctatctctccgggcgcgggcccggcgag
ccgccgccgaccctgtttgactatctccccgccgacggcctgctggtggtggacgagtcc
cacgtcaccattccgcagattggcggtatgtaccgcggcgaccgggcgcgcaaagagacg
ctggtggagtacggcttccgcctgccgtcggcgctcgacaaccggccgctgaagtttgaa
gagtttgaggcgctggcgccgcagaccatctacgtctcggcgacgcccggtaactacgag
ctggagaagtccggcgatgaagtcgtcgatcaggtggtgcgcccgacgggcctgctcgac
ccggttatcgaagtccggccggtggcgacccaggtggacgatctgctctccgagatccgc
gccagggcgcagattaacgagcgcgtgctggtgaccacgctcaccaaacggatggcggaa
gacctcaccgaatacctggaagagcacggcgaacgggtgcgctacctgcactcggatatc
gataccgtcgagcgcatggagatcatccgcgatctgcgcctcggcgagttcgacgtgctg
gtgggtatcaacctgctcagggagggcctcgacatgccggaagtctcgctggtggcgatt
ctggatgccgacaaagagggcttcctgcgctccgagcgatcgcttatccagaccattggc
cgcgcggcgcgcaacgtcaacggcaaggctatcctgtacggcgataaaatcaccccgtcg
atggcgaaggccatcggcgaaaccgagcgccgccgcgagaagcagcaggcctacaacgaa
gagcacggcatcgtgccgcaggggctgaataagaaggtggtcgatatcctcgcgctgggc
gaggggctggcgaagaccagggccaaagggcgcagcaggtcgaagtctaccgggcagtca
gaggccgccgagctggggctgacgccaaaggcgctggagcagaagatccacgcgctcgaa
gcgcagatgatgcagcacgcccgcgatctcgaattcgaggaggcggcgcatgtgcgcgac
cagttgcagcagctgcggcagctgtttattgccgcatcgtaa
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