Pseudochaenichthys georgianus (South Georgia icefish): 117439201
Help
Entry
117439201 CDS
T09629
Symbol
trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pgeo01001
]
117439201 (trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117439201 (trim24)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117439201 (trim24)
Protein kinases [BR:
pgeo01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
117439201 (trim24)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117439201 (trim24)
BRITE hierarchy
Motif
Pfam:
Bromodomain
zf-B_box
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
DUF5054
zf-C3HC4
zf-RING_2
FemAB_like
Motif
Other DBs
NCBI-GeneID:
117439201
NCBI-ProteinID:
XP_033930883
EnsemblRapid:
ENSPGEG00000023934
LinkDB
All DBs
Position
23:20419024..20431456
Genome browser
AA seq
1102 aa
AA seq
DB search
MDESAEKVVTDDIVIIVENEAESLPAEEERLKQQGTFGLMDTCPVCKLSFHNREPKLLPC
LHSFCKRCLPAPFRSADPRRDTQGQLDNNKSLGAIRCPVCRQECWEMDMLDNFFVKDSAE
MPSSTVEKSSQVCMSCDDNTEATGYCVECVEFLCVTCIEAHQRVKFTRDHTIRQKEEMSP
EAVGMSTQKPVFCDVHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHRQYL
ENMTQQLQDKRRAIAEVSGCISNGLQQVDENRKSVTNEIKKSICGLIMEINRKGKILVNH
LEALTKDHEMGLKKQQDDVNSLSRHLDHVINFTKWATASHSGTALLYCKRLILFQIHYLM
RASCNPSIVPQSSVRFQCRSGFWATNVDLGSLVVERGPSTRPPNPNPNPNPTLNHPTLNH
PAGPRAEAPPGSMSASAQQRQSTLAQLQMQTSVVPLSKVDKISQQPQRQPPPNHWSWYQN
VRLPGLPGPPGPPPPTRPIHGGSSPSQGPPSMAQPGRRYGSSQPSTRSPTSSMLHNTGFP
SHQVSAQSLRELIHGSTYPPKPMEMLQGASRYPPPPSAGAAAHMSHHQRGLAEASFLKRS
EAGGSVPSITISIPKPSFAPSQASATTDKMSTFNYLAAVQARQNSPMAKPFSSDRGTGTT
PWKQTAEAPAAPPSKRRRRASPGPVIVIKDEPEDEDEVRFVQSSLPDSSTGAQSIPRPQI
KVSIPVSLPASESGKEQHPAAEPESEKRAEPEEDPNEDWCAVCQNGGELLCCDKCPKVFH
LACHIPALNESPSGEWFCSLCRDLAAPEMEYDCKGKDDPVSEGFPPAERRRCERLLLRLF
CNDFSTDFQQPATPSETKRYKELIKTPMDLSIVKKKLESKAQGGEGYSGPDGFVADVRLI
FLNCAKYYKSVQATSDVGSAGLYLEDYFEEQVKLVYPERLFPGGREEQMIPPLEDEIEEE
EEMMGEGMAPIEDDKPISPAGEEIPPVEEDSTVEETTVPVEENKSEKEMETEMETDVTAA
EEGDMLPSEEAKQDEETPVKEAQSSPAADSETKDKSVPSSLENESSDLLTDTTKDPPDTQ
KTESAPADTAKEGGSDHNREAL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagtgccgaaaaggttgtcaccgacgatattgtcattatcgtggaaaacgag
gcagaaagtttgccagccgaggaagagaggctgaaacagcaaggcaccttcgggctcatg
gatacctgccccgtctgcaagttgagcttccacaacagagagcccaaactactaccatgt
ctgcactctttctgcaagaggtgtctcccagcccccttcaggagtgctgatccaagacgt
gacacgcaaggtcaactcgacaacaacaaatcattgggtgccatacgatgtccagtatgc
agacaggaatgctgggagatggacatgttggacaatttctttgtcaaagattctgctgag
atgccgagcagcaccgtggagaaatccagccaggtgtgtatgagttgcgacgacaacaca
gaggcaactggttactgcgttgagtgtgtggagtttctgtgtgtgacatgtatcgaggcg
caccaaagggtcaagttcaccagggatcacaccatacgccagaaagaggagatgtctcca
gaggcagtaggtatgtccacacagaagcctgtgttttgtgatgtccacaagcaggaaccg
ctgaagctgttctgtgagacgtgcgaccggctcacctgtcgggactgtcagctgctcaag
cacaaggatcacaattaccagtttttggaggatgcgtacaggaaccacaggcagtatctg
gagaacatgacgcagcagttgcaagacaaaagaagggccatcgcggaagtgtctggctgt
atcagcaacggactccagcaagttgatgagaaccggaagtcggtcactaatgaaataaag
aagtccatttgtggcctgatcatggagatcaacaggaaggggaagattctggttaaccat
cttgaggctctgactaaggatcacgagatgggtttgaaaaagcagcaagacgacgtcaac
tccctgagcaggcacctggatcatgtgatcaactttaccaaatgggccacagccagccac
agtggaacagccctgctgtactgcaagagactgatcctctttcagatccattacctaatg
agagcgagctgtaatccctcaatcgtccctcagagttctgttcgctttcagtgtcgctct
ggtttctgggccaccaatgtagaccttggttctctggttgtagaaaggggccctagcacc
cggccgcccaaccccaatcccaaccccaaccccaccctcaaccaccctaccctcaaccac
cctgcaggtcccagagcagaagccccccccggaagtatgtccgcctcagctcagcagcga
cagagcacgctggctcagctccagatgcagacatctgttgttcctctgtccaaggtggac
aagatttcacagcagccccaaaggcaacccccccctaaccactggtcctggtaccaaaat
gtcagactcccagggctcccagggccccccggtcccccacccccaaccagacccatccac
ggagggtcctccccctcccaaggccccccaagcatggcacagccaggccgcagatacggg
agctcccagcccagcactagaagccccacctcctccatgctccacaacacaggcttcccc
tcccatcaggtcagtgcgcagtctctgagagagctgatccatggctccacctatcctcct
aaacctatggagatgttgcagggtgcgtcccgctacccaccgcctccgtctgctggagca
gctgcacacatgtcccaccatcagcggggcctagcggaggcttccttcctgaagaggagt
gaggcaggtggatccgtcccctccatcaccatctccatccccaaaccaagcttcgctcca
agtcaagcttcagcaactacggacaaaatgagcaccttcaattacttagcagcagttcaa
gcaaggcaaaactccccaatggccaaaccgttttcttcagacagaggcacagggacgact
ccctggaagcagactgcggaggctccagctgctccaccatccaagagaagaagaagagcg
tcaccggggccagtcatcgtcatcaaggacgaaccagaggacgaggatgaagtcagattc
gtgcagtccagcctgccggacagcagcaccggggctcagtcgattcctcggccgcagatc
aaggtgtccatcccggtctccctccctgcgtcagagtctgggaaagagcagcatcccgca
gcagagccagagtctgagaagagggcggagccggaggaagatcccaacgaggactggtgc
gccgtctgtcagaacggaggggagctgctctgctgcgacaaatgtcccaaagtttttcac
ctggcctgccacatccccgcactgaacgagtccccgagcggggagtggttctgttcgctc
tgcagagacctcgccgctcctgagatggagtacgactgcaagggcaaagacgaccccgtc
tctgagggattcccgcccgcagaaagaaggaggtgtgagaggctgctactgcgtctgttc
tgcaatgacttcagcactgacttccagcagcccgctactccatcagagacaaagaggtac
aaggagctgattaagaccccgatggatttgtcgatagtgaagaagaaactggagtccaag
gcgcagggaggtgaaggctatagcggtccagacgggtttgtcgcagatgtccggctcata
tttttaaactgtgcgaaatactacaagtctgtacaggcgacctcagatgtggggagtgca
ggtctgtacctggaggactactttgaggagcaggtgaaactcgtctacccagaaaggctc
ttccccggagggagggaagagcagatgatcccccctttggaggacgagattgaggaagag
gaggagatgatgggggaaggcatggctcccattgaagacgataaaccgataagtcctgca
ggagaagaaatcccccctgtggaagaggactcgactgtggaagaaacaacagttccagtt
gaggaaaataagtctgagaaggaaatggagacggaaatggagacggatgtaacggcagct
gaggagggagacatgcttccatcagaggaggcaaagcaggacgaggagacacctgtgaag
gaggcacagagctctccagctgcagatagtgaaacaaaagacaagtcagttcccagctcc
ctggaaaatgagagctctgacctccttacagacacaactaaggatcccccggacacccag
aagacggagtcggctcctgcagacacagccaaagagggggggagtgatcacaacagagag
gcgctgtag
DBGET
integrated database retrieval system
