Pseudochaenichthys georgianus (South Georgia icefish): 117439849
Help
Entry
117439849 CDS
T09629
Symbol
ino80
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117439849 (ino80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117439849 (ino80)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
117439849 (ino80)
INO80 complex (yeast)
117439849 (ino80)
BRITE hierarchy
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DBI_PRT
Motif
Other DBs
NCBI-GeneID:
117439849
NCBI-ProteinID:
XP_033931849
LinkDB
All DBs
Position
24:complement(17504243..17548715)
Genome browser
AA seq
1579 aa
AA seq
DB search
MASGQGGRPEAGASGGSGLAKPLYLQRLERSLRLDSFLRQTAAIFNGDITTSDESDDSDG
GLGTGLSLDAPTQHTALTVKSEPCEEEDGLSEEKPLNGVLLQGTDQKADNASLYNFSKLK
KNRKWLKTILLSDDTTDSDTDSDDSDFCLSRDELQDMLRLHRFTRQHQSKFHSDRELHQY
QYYSTGLLSTHDPFYEQQRHLLGPRKKKIKDEKKFKAKLKKVKKKKKRGEGDFLDDGRPY
ITKIFAKFSHDAPLPVVKKKHLTIEQLNARRRKVWLTIAKKEIPKTFKQKTSAKNLVSTN
AKKLAHQCMREVRRAAIQAQKNCKETLPRARRLTKEMMLYWKKYDKVEKEHRKRAEKEAL
EQRKLDEEMKEAKRQQRKLNFLITQTELYAHFMGGKASMGGPEGDTAQVEILRKLEDSAG
LRQIDIGGGVMVKMGQQDYDSSYYKSQAMRNAKEAYQIHQERTRMFDEEAKDSRCASLHA
VVGPSSGSGFGESYSLANPSIHAGEEIPQPAMFDGKLKGYQLKGMNWLANLYEQGINGIL
ADEMGLGKTVQSIALLAHLAEKDNIWGPFLIISPASTLNNWHQEFTRFVPSFKVLPYWGN
PHDRKVIRKFWSQKTLYTRNAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSST
SVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHDEFNEWFSRDIESHA
ENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQRLLYQALRNK
ISIEDLLQSSMGSSQLSHNTTSSLMNLVMQFRKVCNHPDLFERQETRSPYHMFLKPYVMS
KFLYRHGLIHACNQSKNKLLQVLLSPFSPNHIQQSLFHRKGDDKGSCFSFLRFIDVSPAE
MSNLMLQGTLVRWLALFLSLKAAYRLHHQRLFGLEEEEEEGQEEAGDSLGERGGSQPRSK
CLSRKDLILWLNRPTNFPNVQTSPVLQDLVFTALRPGMMGHTDVMIHCRSSATSTMRPCQ
LTPPPKFLLAATPRVTAVPMERYCDDRSAEYEWRVTRAGGGAVFKQCFLYGSPELASDWR
VRSNSFYPQCPGGVMALYPRHGWSYIRIPDKESLITDSGKLHTLDILLSRLKNQGHRVLI
YSQMTRMIDLLEEYMVYRKHIYMRLDGSSKISERRDMVADFQSRTDIFVFLLSTRAGGLG
INLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICQGSIEERILQRAKEKS
EIQRVVISGGNFKPDTLKPKEVVSLLLDDDELEKKLRQRQDEKKQLEECSKVKERKRKRE
KYAEKHKKNEETENKKKKEVNLVISHAHSADNSNLSADGDDSFISMDMDSAMPSPFSEIS
LSSELQPGSLPPDADADESSSDMLVIVDDPVSSAHQSRATNSPSSVSGSASDNMNGVSAS
DAVSPGRGRSGRSRGRPKGSGGGTKSGGKGRGRKSTAGSAAAMAGAMAGAAAASAAAFAA
YGYSVSKGLAASSPLQPSLGRSGTSPAFNPSRSSSPQARGGASTPSPHKQLAPSHQHHSS
SSSSSHGAVRKGKGPAGAR
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgggcaggggggccgaccggaggctggggcatcagggggctctggcctggcc
aaacctctctacctgcagcgcttggaaagatccctgaggttggacagtttcctgcgccag
actgccgccatcttcaatggagatataaccaccagtgatgagagtgatgacagcgatgga
ggattggggacggggttatccctggacgcccccactcagcatactgctctgaccgtgaag
agtgagccgtgtgaggaagaggatgggctctcggaggagaagcccctcaacggagtcctg
ctgcagggtacagaccaaaaggcagataatgcgagtctctacaacttctccaagctgaag
aagaacaggaaatggctgaagactatcctgctgagtgatgacaccaccgactcggacacg
gactcggatgactctgacttctgtttgtcccgggacgagctgcaggacatgctgaggctc
catcgcttcaccaggcagcatcagagcaagttccactctgaccgggagcttcaccaatac
cagtactacagcactggactcctctcaactcatgatcccttctatgagcagcagcgccac
ctgctgggcccgaggaagaagaaaatcaaagatgagaagaaattcaaggccaaactgaaa
aaggtgaagaagaagaagaaacggggagagggggacttcctggatgatgggcgtccttat
atcaccaagatcttcgcaaagttttcccatgatgctccactgcccgtagtgaagaagaag
catctcaccattgagcagctgaacgcacggcggcgtaaagtctggctcactatcgctaaa
aaggagattcccaagactttcaagcagaagacctctgctaagaacttagtatcgaccaat
gccaaaaagttggctcatcagtgcatgagagaggtccggcgcgctgccatccaggcccag
aagaactgcaaggagacgttaccgcgggcccgccgcctcaccaaggagatgatgctctac
tggaagaaatacgacaaagtggagaaggagcacaggaagagggcggagaaggaggctctg
gagcagcgtaaactggacgaagagatgaaagaagccaagcgtcagcagcgtaaactgaac
ttcctcatcacacagacggagctgtatgctcacttcatggggggtaaagccagcatgggg
ggtccggagggagacacggctcaggtggagattctgaggaagctggaggacagtgcgggt
ctcagacagatcgacatcggaggaggagtgatggtcaaaatgggacagcaggattacgat
agcagttactacaagtcccaggcgatgaggaatgctaaagaagcctaccagattcaccaa
gagagaacgcggatgtttgacgaggaggccaaggacagccgctgtgcgtcgctgcacgcc
gttgtaggcccgtcctcaggctcagggttcggagagagctacagcctcgccaacccctcc
atccacgccggcgaggagatccctcagcccgccatgttcgacggcaagctcaagggttac
cagctcaagggcatgaactggcttgccaatctttatgaacagggaatcaatggaatcctg
gcagatgagatgggactgggaaagacggtccagagtatcgccctgttggctcacttagca
gagaaggacaacatctggggtccattcctgatcatctctcctgcatccacgctcaacaac
tggcatcaggagttcactcgcttcgtgcccagtttcaaggtgttgccatactgggggaat
ccacacgatcgcaaagtgattcggaagttttggagccagaaaaccctttacacgcgaaat
gccccgttccatgtggtgatcaccagctaccagctcgtcgtgcaggacgtgaagtacttc
cagagggtcaagtggcagtacatggtcctggatgaggctcaggctctgaaaagcagcacc
agtgttcggtggaaaatccttctgcagttccagtgtcgaaacagactgctgctaaccggg
acgcccatccagaacactatggctgagctgtgggccctgctgcacttcatcatgcccaca
ctgttcgattcccacgacgagtttaacgagtggttctccagagacatcgagagccacgct
gaaaacaagtctgccatcgatgagaaccaactctccagactgcacatgatcctcaagcct
ttcatgctgcgcagaatcaagaaggatgtggaaaacgagctctcagacaagattgagatc
ctgacctactgccagctgacgtcccggcagaggctgctctaccaggctctgaggaacaag
atctccatcgaggatctactgcagtcctccatgggctcgtcacagctgtcccacaacacc
acctcctccctcatgaacctggtcatgcagttcaggaaggtgtgtaaccaccctgacttg
ttcgagcgccaggagactcgctctccgtaccacatgttcctgaaaccctacgtcatgtcc
aagttcctctaccgccacggcctcatccacgcatgcaaccagtccaaaaacaaattactc
caagtgctgttgtctcccttctcccccaatcacatccagcagtctctttttcacagaaaa
ggtgacgacaaaggaagctgtttctccttcctgcgcttcatcgacgtctcaccagctgag
atgtccaatctcatgctgcaaggaaccttagtaaggtggttagccctttttctgtccctc
aaagctgcctatcggctccaccatcagcgcctgttcggccttgaagaagaagaagaagag
ggtcaggaggaagccggagactcactgggggagagaggggggtcacaacccaggagtaaa
tgtctgtctcgcaaggacttgatcttgtggctgaacagacccaccaatttccccaacgtg
caaaccagccctgtcctgcaggacttggtgttcacagccttaagaccgggcatgatggga
cacacagacgtgatgatccactgtcgaagctccgccacttccacgatgcggccctgccaa
ctcacaccgccacccaagttcctgctagctgccacgcccagggtgacagcagttcccatg
gagcgttattgtgatgaccgcagtgcagagtacgagtggcgggtgacgcgcgcggggggg
ggcgcagtcttcaaacagtgtttcctctacggctctcctgaacttgcctcggattggcgt
gtgaggtccaattccttctacccacaatgccctgggggtgtgatggccctctacccacga
catggatggtcctacatccggatacctgataaggagagcctgatcacggacagtggcaag
ctccacaccttggatatcctgttgagtcggctaaagaaccagggacacagagtcctcatc
tactcccaaatgacccgcatgatagacctgctggaggaatacatggtctatcgtaagcac
atctacatgcgcctcgacgggtcctccaagatctcagagcgcagagacatggtggcggat
ttccagagccggacggacatctttgtgtttctgctgagtacgagggctggagggctcggc
atcaacctgactgctgctgacactgttatcttctacgacagtgactggaaccccacggtg
gaccagcaggccatggaccgagcccacaggctggggcagaccaagcaggtgaccgtctac
cgcctgatctgtcaggggtccatcgaggagaggatcctgcagcgggccaaggagaagagc
gagatccaaagggtggtgatctcaggaggaaacttcaaacccgacacactgaaacccaaa
gaggtggtcagcctgctgctggatgacgacgagctggagaagaaactgcgtcagagacag
gatgagaagaagcagctggaggagtgcagcaaggtgaaagagcgcaagaggaagcgggag
aagtacgctgagaagcataagaagaacgaggagacggagaacaagaaaaagaaggaggtg
aacctggtcatctctcacgctcactctgcagacaactccaacctctctgctgacggagac
gactccttcatcagcatggacatggactcagccatgcccagtccttttagtgagatctcc
ctgagcagcgagctccagcccggctcgttgcccccggacgccgacgccgacgagagcagc
agtgacatgctggtcatcgtggacgatccggtgtcctcggcgcaccagtcccgcgccaca
aactccccctcctcagtgtccggatcggcctccgacaacatgaatggtgtttctgcctcg
gacgcggttagtcctggcagaggccggtctgggcggagtcgggggcggcccaaaggatct
ggaggcgggactaagtctggaggtaaaggacgcgggcgcaagtcgacagcgggcagtgcg
gcggccatggcgggggcgatggccggagcagcggctgcctctgcagcagcttttgctgcg
tacggttacagtgtctctaaaggcctcgctgcgtccagccccctgcagccttccctgggc
cggtccggtaccagccccgccttcaaccccagcaggagctcctctccgcaggccagagga
ggggcctccacccccagcccccacaaacagctggcccccagccaccagcaccacagcagc
agtagcagcagcagccacggcgcagtcaggaagggcaagggtcccgctggggctcgatag
DBGET
integrated database retrieval system
