Pseudochaenichthys georgianus (South Georgia icefish): 117442249
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Entry
117442249 CDS
T09629
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117442249
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117442249
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
SPRY
zf-RING_2
zf-RING_5
zf-Nse
U-box
zf-RING_11
MRP-S31
Motif
Other DBs
NCBI-GeneID:
117442249
NCBI-ProteinID:
XP_033934138
EnsemblRapid:
ENSPGEG00000018922
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MAQGGVQLDQETFSCPICLDPLKDPVTIPCGHSYCMDCLKHHWDGEGIHSCPQCRQSFAP
RPVLLKSTMLTALVEELKKTGLQAAPADLCYAGEEDVGCDVCTGRKLRAFRSCLQCVASY
CETHLQPHFESAALQKHKLVEPSKLRENICSRHDEVKKLFCRTDQQSICSLCSVDEHKGH
DTVSAAAERTERQRELAGSRLNIQQRIQDGEKEVKLLQQDVEAVNGSADKAVDDSEKTFT
ELIRLMEKRRSDVKQQLRSEQDREVSRVREIQEKLELELRDLKRRDAELEQLSLTGDHNQ
FLHSYSSLPALSEATHSSSINVRPLRYFEDVTAALSDLRDKLQDVLRDKWTEEDVLRPPP
EPQTRAGFLKYSREITLDPNTAHTQLLLSEGNRRATVKRQTQPYPSHPDRFTDHEQVLSR
ESLTGRCYWEVERRGGVSIAVAYKDTTRSGRLKDSSFGHNDTSWALEHYKLGYKFWYNNV
HSHLSGPWSGRIGVYLDHGAGILSFYSVIDDTMTLLHRVQTAFTQPLHAGLWLYYYSGDT
AEFCELK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagggaggagttcagctggaccaggaaaccttctcgtgtcccatctgtctggat
ccactgaaggacccggtgacgatcccctgtggacacagctactgcatggactgcctcaaa
caccactgggatggagagggaatccacagctgccctcagtgcagacagagcttcgcaccg
aggcctgtcctgctgaagagcaccatgctaacagctttagtggaggagctgaagaagact
ggactccaagcggctcctgctgatctctgctatgctggagaggaagacgtgggatgtgac
gtctgcactgggaggaagctgagagccttcaggtcctgtctgcagtgtgtggcctcttac
tgtgagacacacctccagcctcactttgaatcagccgcattacagaagcacaagctggtg
gagccctccaagctcagagagaacatctgctctcgtcacgacgaggtgaagaagctgttc
tgccgcactgatcagcagagtatctgttctctctgctctgtggacgaacacaaaggccac
gacacggtgtcagctgcagcagagaggaccgagaggcagagagagctggcggggagtcga
ctcaacatccagcagaggatccaggacggagagaaggaggtgaagctgcttcagcaggac
gtggaggccgtcaatggctctgctgacaaagcagtggatgacagtgagaagacgttcact
gagctgatccgtctcatggagaagagacgctctgatgtgaagcagcagctcagatctgag
caggacagggaagtgagtcgagtcagagagattcaggagaagctggagctggagctcagg
gatctgaagaggagagacgctgagctggagcagctctcactcacaggggatcacaaccag
ttcctgcacagctactcctcactgccagccctcagtgaagctacacactcctccagcatc
aacgtccgtcctctgagatactttgaggacgtgacggcggccctgtcagatctaagagat
aaactacaggacgtcctgagggacaagtggactgaagaggatgtgttacggccaccacca
gagccacagaccagagctgggttcttaaaatattcacgtgaaatcactctggatccaaac
acagcacacacacagctgttactgtccgaggggaacagaagagcgacagtaaagagacaa
acacagccctatcccagccacccagacagattcactgatcacgagcaggtcctgagccga
gagagtctgactggccgttgttactgggaggtggagcggagagggggggtttctatagcc
gtcgcttacaaggacaccaccagatcagggaggttgaaggattctagctttggacacaat
gacacatcctgggctttagagcattacaaactaggttataaattctggtacaacaatgtc
cattctcacctctcaggtccctggtctggcaggataggagtttacctggatcacggtgca
ggtattctgtccttctacagcgtcatcgacgacaccatgaccctcctgcaccgagtccag
accgccttcactcagccgctgcacgctggactttggctttattattattctggagacacc
gctgagttctgtgaactcaaatag
DBGET
integrated database retrieval system
