Pseudochaenichthys georgianus (South Georgia icefish): 117442252
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Entry
117442252 CDS
T09629
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117442252
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117442252
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
SPRY
zf-RING_2
zf-RING_5
U-box
zf-Nse
DivIC
zf-RING_11
MRP-S31
Prok-RING_4
RSS_P20
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
117442252
NCBI-ProteinID:
XP_033934142
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MAQGGVQLARETFSCPICLDPLKDPVTIPCGHSYCMDCLKHHWDGERIHSCPQCRQSFAP
RPVLLKNTMLAALVEELKKTGLQEAPADLCYAGEEDVGCDVCTGRKLRAFRSCLQCVASY
CETHLQPHFESAALQKHKLVEPSKKLRENVCFRHDEVLKLFCRTDQQSICYLCSVDEHKG
HDTVSAAAERTEKQRELEGSRLNIQQRIQDGEKEVKLLQQEVEAVNGSADKAVEDSEETF
TELIRLMEKRCSDVKQQLRSQQDREVSRVREIQEKLEQEIRDLKRRDAELEQLSLTEDHT
QFLHSYSSLPAPLSETPHSSSINIGPLYYFEDVTVALSDLRDKLQDVLRDNWTEEDVLRP
PPEPQTRAGFLKYSREITLDPNTAHTQLLLSEGNRRATVKRQTQPYPSHPDRFTDHEQVL
SRESLTGRCYWEVEWRGGVSIAVAYKETTRSGRLKDSRFGHNDTSWALEHYKLGYKFWYN
NVHSHLSGPWSGRIGVYLDHGAGILSFYSVIDDTMTLLHRVQTAFTQPLHAGLWLYYYSG
DTAEFCELK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagggaggagttcagctggcccgggaaaccttctcgtgtcccatctgtctggat
ccactgaaggacccggtgacgatcccctgtggacacagctactgcatggactgcctcaaa
caccactgggatggagaacgaatccacagctgccctcagtgcaggcagagcttcgcaccg
aggcctgtcctgctgaagaacaccatgctagcagctttagtggaggagctgaagaagact
ggactccaagaagctcctgctgatctctgctatgctggagaggaagacgtgggatgtgac
gtctgcactgggaggaagctgagagccttcaggtcctgtctgcagtgtgtggcctcttac
tgtgagacgcacctccagcctcactttgaatcagccgcattacagaaacacaagctggtg
gagccctccaagaagctcagagagaacgtctgctttcgtcacgacgaggtgttgaagctg
ttctgccgcaccgatcagcagagcatctgttatctctgctctgtggacgaacacaaaggc
cacgacacggtgtcagctgcagcagagaggactgagaagcagagagagctggaggggagt
cgactcaacatccagcagaggatccaggatggagagaaggaggtgaagctgcttcagcag
gaggtggaggccgtcaatggctctgctgataaagcagtagaggacagtgaggagacgttc
actgagctgatccgtctcatggagaagagatgctctgatgtgaagcagcagctcagatcc
cagcaggacagggaagtgagtcgagtcagagagattcaggagaagctggagcaggagatc
agggatctgaagaggagagacgctgagctggagcagctctcactcacagaggaccacacc
cagttcctgcacagctactcctcactgccagcccccctcagtgaaactccacactcctcc
agcatcaatataggtcctctgtattactttgaggacgtgacagtggccctgtcagatcta
agagataaactacaggacgtcctgagggacaactggactgaagaggatgtgttacggcca
ccaccagagccacagaccagagctgggttcttaaaatattcacgtgaaatcactctagat
ccaaacacagcacacacacagctgttactgtccgaggggaacagaagagcgacagtaaag
agacaaacacagccctatcccagccacccagacagattcactgatcacgagcaggtcctg
agccgagagagtctgactggccgttgttactgggaggtggagtggagagggggggtttct
atagccgtcgcttacaaggaaaccaccagatcagggaggttgaaggattctagatttgga
cacaatgacacatcctgggctttagagcattacaaactaggttataaattctggtacaac
aatgtccattctcacctctcaggtccctggtctggcaggataggagtttacctggatcac
ggtgcaggtattctgtccttctacagcgtcatcgacgacaccatgaccctcctgcaccga
gtccagaccgccttcactcagccgctgcacgctggactttggctttattattattctgga
gacaccgctgagttctgtgaactcaaatag
DBGET
integrated database retrieval system
