Pseudochaenichthys georgianus (South Georgia icefish): 117445184
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Entry
117445184 CDS
T09629
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgeo01002
]
117445184 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117445184 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117445184 (usp13)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117445184 (usp13)
Peptidases and inhibitors [BR:
pgeo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117445184 (usp13)
Ubiquitin system [BR:
pgeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117445184 (usp13)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117445184 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
117445184
NCBI-ProteinID:
XP_033936537
EnsemblRapid:
ENSPGEG00000018311
LinkDB
All DBs
Position
4:complement(12345733..12378026)
Genome browser
AA seq
873 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPRTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKERNTGAAGCAIPRRKNGKVFLDLELNRDFNGEDFEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWDEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGTVLCGKWFFDGSGGNGHALVHYKETKYPLAVK
MDTITPDGADVYSFEEEEAVLDPHISDHLSHFEIDMLQMQTKTENGHHTENNSRPRVSEW
EVIQESGMKLKAVFGSGYTGIKNLGNSCYVGTVIQVLFSIPDFQRMYVGNLQRIFDYSPL
DPSQDFATQMAKLGHGLLSGLYSKPPMKSELIEQVMKEEYKHQQKGVSPRMMKSLISRGH
PEFSSTRQQDAQEFLLHVINMVERNSAGSENPSDAFRFLVEERIQCCQSRRVRYNQRVDY
CIQLPAPFEAATNREELLAYGAKRREAEENMRAPPEPVRARIPFTACLQAFTEPDNVPDF
WSSALQAKSAGVKTSRFATFPEYLILQIKKFTFGVDWVPKKIDVAIDVPDFLDLSRMRAT
GLQAGEQELPDLLPPIVLAEDTRDNSMGSADSPEIDEAAAMQLAEMGFPVEACRKAVYYT
GNMGPEMAFNWIIAHMEEPDFAEPLTLPSMIDLGPSISDSPLGAPPLGNSPPEESIAILT
SMGFPRTHSIQALKATNNNLERALDWIFIHPEEEESDVLSDMAATEPNGFSNGNSHSNST
VSPDREAAGPRVKDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWVIYNDHKVCLSER
PPKDLGYIYFYHRLSSSSTKDTVPPNPLRHATF
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctcggagagctgctggtcccatacatgcccaccatcagagtgcccagg
accggggacagggttttcaagagcgagtgcgccttctccttcgactctcccgagtcagag
ggaggcctgtatgtgtgtatgaacacattcctcggctttggacgagaacatgtggagaga
cattatcgcaaaacaggacagagcgtttacatgcacctcaaacgacacgtcaaagagaga
aatacgggagctgcaggatgcgccatccccagacgaaagaatggaaaagtatttctagat
ttagagctaaaccgtgattttaacggagaagactttgaatatgaagacgaggccaaactt
gtcatttttccagaccacttcgagatccccttaccaaatatcgaggagttgcccgctctg
gtcaccatcgcctgcgacgcagtgctcaatgcaccatcagcttacaagaagcaggagcct
gaatcctgggatgaggagatccaggtgtccagacatgccaggagcctcagacagctggac
aatggggtcaggatcccacccagcggctggaagtgtcagaagtgtgagatgagggagaac
ctgtggttgaacctgacagatggaacagtgctctgtgggaagtggttctttgatgggagc
gggggaaacggccacgctctggtgcactacaaagagaccaaatacccgctagctgtcaaa
atggacaccatcacaccagatggagcagatgtgtactcgtttgaggaggaggaagctgtt
ttggacccccacatatcagaccacttgtcacactttgaaatagacatgctccagatgcag
acaaaaacagagaacggtcaccacacagagaataactcccggccgcgggtcagtgaatgg
gaggtgatccaggagtcgggcatgaagctgaaggcggtgtttggatctggctacactggc
atcaaaaacctgggcaacagctgctacgtcggcacggtgatccaggtcctgttcagcatc
ccagacttccagaggatgtatgtgggtaatctccagaggatatttgactattcacccctc
gaccccagccaggacttcgccacacaaatggctaagctgggacatggactgctctcaggc
ctgtactccaaaccgccaatgaaatccgagctcattgaacaggtgatgaaagaagaatac
aagcaccagcagaagggcgtctccccccggatgatgaagtctctaatcagcaggggacac
ccagagttttcctctacgagacaacaagacgcccaggagttcctcctgcacgtcatcaac
atggtggagaggaacagcgcaggctcggagaatccaagcgacgccttccgcttcctggtg
gaggagcgaatccagtgctgccagtctcgccgggtccgttacaatcagcgggtcgactac
tgcatccagctgccagctccctttgaggcggccaccaatcgagaggagctgctggcatac
ggggccaagcgaagggaagcagaggagaacatgcgggctcctcctgagccggttcgagcc
aggatccccttcaccgcctgcctgcaggccttcacagagccggacaacgtccccgacttc
tggagctcagcgctgcaggccaagtcagccggagtcaaaacttcccgtttcgccaccttc
cctgagtatctgattttgcagattaagaaattcacatttggggttgactgggtgccgaag
aaaatagatgtggccattgatgtcccagactttctggatttgagtcggatgcgagccaca
gggctgcaggccggtgaacaggagctgcctgacctcctgcctcccatcgtgctcgctgaa
gacaccagagataactccatgggctctgcagactctccagaaatagacgaggcggcagca
atgcagctggcagagatgggcttcccggtggaggcgtgcaggaaggcggtctactacacg
ggcaacatgggccccgagatggccttcaactggatcatagcccacatggaggagcctgac
tttgcagagcctctcactctgccctccatgatagatctcggtccctccatcagcgacagc
cccttgggcgcccccccgctgggaaactcgccccctgaggagagcattgccatcctcacc
tcgatgggcttcccccgcactcacagcatccaggcactcaaagccacgaataataatctt
gagcgagcactcgactggatcttcatccaccctgaggaagaggagagtgatgtcctctca
gacatggctgccacggagccaaacggcttctccaacggaaactcacacagcaactccacg
gtgtccccggaccgagaggcagcgggcccccgggtcaaagacggaccgggacgttatgag
ctctttgctttcatcagtcacatgggagcgtccacaatgtccggacattatgtttgtcac
atcaagaaggaaggaaggtgggtgatctacaacgaccacaaagtgtgtttgtcagaaagg
cctccaaaagacttgggctacatctacttttaccatcgactgtcaagcagttcaactaaa
gataccgtcccccctaaccccctccgccatgcaaccttttag
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