Pseudochaenichthys georgianus (South Georgia icefish): 117445858
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Entry
117445858 CDS
T09629
Symbol
rbfox2
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117445858 (rbfox2)
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117445858 (rbfox2)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
DUF3182
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
117445858
NCBI-ProteinID:
XP_033937653
EnsemblRapid:
ENSPGEG00000025051
LinkDB
All DBs
Position
1:complement(28368356..28401355)
Genome browser
AA seq
463 aa
AA seq
DB search
MLMSTDVASIMLPVSRGLMDRDRELDPMAGVHPNVGGPAAVVRGMKRGDPEPDGLTAAAL
VDSTGAECKRPRIDGSGGIGEVGQNNDPLTLGYHGYPSLSQGAQDNAGGQEGLVPPPFSA
FPPPPPPPPQNGLALDYGGSLYAAGAIQGPVELGGAVNSAANAASLSVQQSDGSSQIDGQ
SGVGSGGGGSIGDDTDAKGSPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFNERGS
KGFGFVTFETSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKMATPYSNGEGLATLP
YAGWKLSPMVGAMYSPELYTVPGFPYPAAAAAAAASTAATFRGAHLRGRARPVYSAVRAA
VPQPAIPTYPGVMAYQDGFYGAADLYGGYAAYRYAQPTAVANPAAAAAAAAAAYSDSYGR
VYTADPYHAALNPAAYGVGAMVSSLSPYQAALYRGGYSRFAPY
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtctaccgacgttgcatccatcatgctgcctgtatcccggggtctcatggac
cgggatagagagctggaccccatggccggggtgcaccctaacgtgggcgggcctgctgcg
gttgtccggggtatgaagcgcggagacccggagcccgacggactgacagcggctgctctg
gtggactctaccggggcggagtgcaagcgtccccggatcgacggctcgggagggatcggc
gaggttggccagaacaacgaccctttgacccttggctaccatggctacccatctcttagt
cagggcgctcaggataatgctggcggtcaggagggcctcgtacccccgcctttctctgcc
ttccctccacctccaccgccgcccccccagaacggcttggccctggattacgggggcagc
ctgtatgcagcgggggccatccagggccccgtggaactcggtggagcagtgaacagtgcc
gccaacgctgccagcctcagtgtccaacagtcagatgggtcctcccagattgacggtcag
tcgggtgttggctcaggaggtggagggagcatcggggacgatacagacgccaaggggtcg
cccaaacgcctccacgtgtccaacatccccttccgcttcagagaccccgacctacggcag
atgtttggtcaatacggcaaaatccttgatgtcgagatcattttcaatgaaagaggatcc
aagggttttggttttgtaactttcgagacgagtgcagatgcagagagggccagggagaag
cttcacggtacgctggtggaaggacgtaaaatcgaggtgaataatgccacagccagagtg
atgacaaacaagaagatggcgaccccgtactctaacggagagggcctcgctactctgcca
tacgcagggtggaagttgagtcctatggttggtgccatgtacagccctgaactctataca
gtaccagggttcccatacccagcagcagcagccgcagcagctgcctccaccgcagcgacc
ttccgaggcgctcacctgcgcggccgcgcgcggcccgtctatagtgcggtccgggcggct
gtgcctcagcccgccatccccacctaccctggtgtgatggcctatcaggatggcttttac
ggtgcagctgatctctatgggggctatgctgcgtatcgttatgcccagccgactgcggta
gcaaatccggcagcagcggcggcggctgcagcagcagcttacagtgacagctacggacga
gtttacacagcagacccttaccatgctgcgctcaacccagcggcctatggcgtgggagca
atggtaagttccctcagcccatatcaggccgcgctgtacaggggaggatacagtagattt
gccccttactaa
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