Pseudochaenichthys georgianus (South Georgia icefish): 117446159
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Entry
117446159 CDS
T09629
Name
(RefSeq) leucine-rich repeat neuronal protein 1-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117446159
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117446159
BRITE hierarchy
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_1
ig
V-set
Ig_2
Pur_ac_phosph_N
LRRCT
fn3
LRRNT
Peptidase_M73
Ig_5
LSR
Motif
Other DBs
NCBI-GeneID:
117446159
NCBI-ProteinID:
XP_033938064
EnsemblRapid:
ENSPGEG00000022894
LinkDB
All DBs
Position
5:complement(22539618..22549563)
Genome browser
AA seq
713 aa
AA seq
DB search
MALSSKPPLLWLCLGLFLSLISPVHGKECPHLCVCEIRPWFTPQSTYKEATTVDCNDLRL
THIPTNVSTDTQVLLLQSNAISHTRGELEALFNLTELDLSQNNFSTVEAVGLTGMNHLTT
LHLEENQISKLPDQCLGNLSNLQELYINHNQISSISPRAFAGLHSLLRLHLNSNRLHVID
SRWFEETPNLEILMIGENPVFGLLDMNFKPLKSLRSLVLAGMDLTDVPANAFVGLDSLES
ISFYDNKLVRIPQLALQKVPNLKFLDLNKNPVLKIQEGDFRNMLHLKELGINNMMELVSI
DRYALDNLPELTKLEATNNPKLSYVHKLAFRDMSSLESLMLNNNALTALYQHTVEVLPNL
REISLHRNPLRCDCVIQWMSSNRTSVRFMEPVSMLCTSPPELRGQPVRELRLLDSPEQCL
PLISHDTFPSHLNLELGMSVSLDCRAMSEPEPEIYWVTPLGSKISIDTVSERYHLNNEGT
LRLSHVQVEDSGRYTCVAQNTEGADTRVATIRVNGTLLDSAEVMKIYVKQTEPHSILVSW
KVNSNIMSSNLKWASATMKIDNPHITYTARVPVEVHEYNLTHLQPATEYEVCLTVSNVHL
QTHKSCVNVTTRIATFAMDRSAQHPSAAVLAVMATMLAILSLGTVGVYIARRWKRKNYHH
SLKKYMMKTSSIPLNELYPPLINLWEAEAEKDKDSSAEGKPSPVDTTRSYYMW
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcactcagctcaaagcctcctctcctctggctgtgcttgggattatttctttcctta
atttcgcccgtgcatggcaaagaatgtcctcatttgtgtgtatgcgagatccgaccatgg
ttcaccccccagtctacctacaaggaggcgaccacagtggactgcaatgatctgaggctc
acgcatatccctaccaacgtgtccactgatactcaggtgttactgctccaaagtaacgcc
atctctcacaccagaggcgagctggaggcactgttcaacttgacagaattggacttgtcc
cagaacaacttcagcactgtggaagctgtgggcctcacaggcatgaaccacctgaccacc
cttcacctagaggagaaccagatcagcaagttgccagaccaatgcctgggaaacctctcc
aatctccaggagctttacatcaaccacaaccagataagctccatttcccctcgggccttc
gcaggtctgcacagcctgctgcgcctccatcttaactccaacaggctccatgtcatagac
agtcgctggtttgaagaaacacctaaccttgagatcctcatgatcggggagaacccagtg
tttggcctactggacatgaacttcaagcctctaaaaagcttgaggagtcttgtcttggct
ggcatggacctcactgatgttccagcaaatgcttttgttggtttggatagccttgaaagt
atttctttctatgacaacaaactggtaagaatccctcaactggcccttcaaaaagttccc
aatctgaaattcttagatttaaacaagaatccagttctcaaaatccaagaaggagatttc
aggaacatgttacatttaaaggagctgggcatcaacaatatgatggagttagtttcaatt
gaccgctatgccctggacaacctaccagaactgacaaagctggaggccactaacaaccca
aagctgtcctatgtgcataaattggcttttagggacatgtcgtctttggagagcctcatg
ctgaacaataacgccctcactgccctttaccagcacactgtagaagtgttgcctaatctg
cgggagatcagtctgcatcgtaacccattgcgttgcgactgtgttattcagtggatgagt
tccaacagaacgagtgtgcgcttcatggagcccgtctccatgctctgtacctccccacca
gaactcagaggtcagccggttcgagagttaaggctgctggattccccggagcaatgcctg
cccctcatatcccacgacaccttccccagccacttgaacctcgagctgggcatgagtgtc
agtcttgactgcagggccatgtctgagccagagcctgagatctactgggtgactcctctt
gggtccaaaatatcaattgacactgtgtcagagcggtaccacttgaacaatgaggggact
ctgcggctgtctcatgttcaggttgaggattctggtcgttacacctgtgtggctcagaac
acagaaggagcagacacacgggttgccaccatccgtgtaaatggcactctgctcgacagc
gccgaggtgatgaaaatatatgtcaagcagaccgagccgcactccatccttgtttcctgg
aaagttaattccaacatcatgtcctccaacctgaagtgggcctcagccaccatgaagatt
gacaacccccatatcacttacacagctcgtgttcctgtagaggttcatgagtacaacctc
acacaccttcaacctgctactgagtatgaggtatgcctcacggtctccaatgtccacctg
cagacacacaagtcctgtgttaatgtgacaacacgcatcgctaccttcgccatggaccgg
tcagcccagcaccccagtgcggctgtgttggctgtcatggcgaccatgctggctatcctt
agtctgggcacagtgggtgtctacattgcccgcagatggaagaggaaaaactaccaccac
tctctgaagaaatacatgatgaagacttcctccatccccctgaacgagctctaccctccg
ctcatcaacctgtgggaggctgaagcagagaaggacaaagacagcagcgcagagggaaaa
ccctctcctgttgacaccacacgtagttattacatgtggtga
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