Pseudochaenichthys georgianus (South Georgia icefish): 117447520
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Entry
117447520 CDS
T09629
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03420
Nucleotide excision repair
pgeo04115
p53 signaling pathway
pgeo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117447520 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
117447520 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
117447520 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117447520 (ddb2)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117447520 (ddb2)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
117447520 (ddb2)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117447520 (ddb2)
BRITE hierarchy
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
117447520
NCBI-ProteinID:
XP_033940120
EnsemblRapid:
ENSPGEG00000017220
LinkDB
All DBs
Position
6:30672918..30678021
Genome browser
AA seq
493 aa
AA seq
DB search
MKTRQAKSADESESKGRVKKRAGENSGPALSKKLRERKDGETSKQVPPLKSTGVQKRAGY
GSILHYLYKSTLGQSLHSQMKQCLQEPFVRSLSSYQFHGATSPFDRRITCLEWHPTHLTT
LAVGSKGGDIYLWDFEAPGKKTFLQGNGAGDFIGGMTFCPSDPSKLIVASGEGTLNMLSF
EGHPPTVLSRTQDCGHDHHHVCHWYCCVDVSVSRQMLVTGDNVGHLVLLGLDGQKIFSEK
LHKAKVTHAEFNSRCDWLLATASVDHTVKLWDLRNIKDKKSFLHEMPHDKAVNSAYFNPL
DCSKLLTTDQYDQIRIYSSPDWSKPQHIIQHPHRQFQHLTPIKATWHPVYDLIMAGRYPD
NRVCPGDQRTIDIFDSNTAELVCQLQDPTVSGIKSVNKFSPMGDVIGSGMGVSVLVWNRN
RLLMSDESTAQEETSASAESSGSQRRNRQRPSRERRGPALDAKLKKKLPSLEETETKTKT
KSIKEKLAEMRKK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaagacaggcgaagtcagcagatgaatctgaatcaaagggaagagtgaagaaa
agagccggggagaactctggtccagctctctccaaaaaactacgagaaagaaaagatgga
gaaacatccaaacaagtgcctcctctcaagtctacaggagtccagaagagagcagggtat
gggagcatcctgcactacctttacaagagcactctgggacaaagtcttcactcacagatg
aaacagtgtcttcaggaacctttcgtccgctcgctgtcttcatatcagttccacggggcc
accagccccttcgaccgcagaatcacctgtctggagtggcatcccactcacctcaccact
ctggctgtgggctccaaaggtggagacatatatctgtgggactttgaggcgcctgggaag
aaaacctttctccaagggaacggagcaggagactttattggagggatgacattttgcccg
tcagacccctccaaacttattgtggcttctggtgagggcacactgaacatgctgagcttt
gagggccacccacccaccgttctgtcccgaacccaagactgtggccacgatcaccaccat
gtttgtcactggtactgctgcgtggatgtgtctgtaagtcgacagatgcttgtgacaggg
gacaatgtgggacatctcgtactcctgggtttggacggccaaaagattttcagtgagaag
ttgcacaaagccaaagttacccatgcagagttcaactcccgctgtgattggttgttggcg
accgcatcagtcgaccacacggtgaaactttgggacctgagaaacatcaaagacaagaag
agctttctccacgagatgccgcatgataaagctgtcaactcagcctatttcaaccctctg
gactgctccaagttgctcaccacagatcagtacgaccagatccggatctactcctctcct
gattggtcgaagcctcaacatatcatccaacatccacacagacagtttcagcatctcacg
cccatcaaggccacatggcaccctgtctatgacctcatcatggcaggccgttaccccgac
aaccgggtttgccccggagaccagaggaccatcgacatctttgactccaacacagcggag
cttgtgtgtcagctgcaagatcccaccgtctcaggtatcaaatctgtaaataaattcagt
ccaatgggtgatgtgattggatctggaatgggtgtgtcggtgctggtctggaatagaaac
aggttgttgatgagcgatgagtccacagcgcaggaggaaacttctgcctcagcggaaagt
tcaggaagccagcggaggaataggcagcgccccagcagggagaggagaggaccggctctg
gatgcaaagctcaagaagaaactgccttctctagaagaaacggaaaccaagaccaagact
aagagcattaaagaaaagctagcagagatgaggaagaaataa
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