Pseudochaenichthys georgianus (South Georgia icefish): 117448879
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Entry
117448879 CDS
T09629
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117448879
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117448879
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
zf-RING_6
U-box
RSS_P20
MRP-S31
Nop16
WDCP
Motif
Other DBs
NCBI-GeneID:
117448879
NCBI-ProteinID:
XP_033942070
EnsemblRapid:
ENSPGEG00000005029
LinkDB
All DBs
Position
7:4616128..4620921
Genome browser
AA seq
555 aa
AA seq
DB search
MAQKGVQLGRKISCSICLDLLKDPVTTSCGHSYCMKCIKGFWDGEDEKKTHSCPQCRQSF
TPRPVLLKNTMLAALEEELKKTGPPAAPADLCYAGAGDVACDVCTGRKLRACKSCLVCLT
SYCDKHLQPHYESAVFKKHKLVEPSKKLQENICSRHDEVKKLFCRTDQQSICSLFSVDEH
KGHDTVSAAAERTERQREVEGSRLNIQQRIQDGEKEVKLLQQEVQAVNGSADKAVEDSEK
TFTELIRLMEKRSSDVKQQLRSQQEREVSRVRELQEKLEQEIRELKRRDAELKLLSHTED
HNQFLLSYPSLPAPLSEATHSSSTNIRPLSYFEDVTAGLSAVRDKLQDALREEWTNVSST
EVDVLLSAAEPASRAGFLQYSQEITLDPNTAHTQLLLSEGSRKATLMGPHHSYSSHPDRF
TLYPQVLSRESLTGRCYWEVEWRGEAVCVAVADKNISRSGGGDESGFGNNDKSWSLDCYL
NRYSFCYNNIQTPVSGPPSSRVGVYLDHRAGVLSFYSVSETMTLLHRVQTTFTQPLHSGV
RLCYVGATVELCKLK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctgggccgcaaaatctcttgttccatctgtctggatcta
ctgaaggatccggtgacgacttcctgtggacacagctactgcatgaagtgtattaaaggc
ttctgggacggagaggatgagaagaagacccacagctgccctcagtgtaggcagagcttc
acaccgaggcctgtcctgctgaagaacaccatgttagcagctttagaggaggagctgaag
aagactggaccgccagctgctcctgctgacctctgctatgctggagctggagatgtggcc
tgtgatgtctgcactgggaggaagctgagagcctgtaagtcctgcctcgtgtgtctgacc
tcttattgtgacaaacacctccagcctcattatgaatcagctgtctttaagaaacacaag
ctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtgaag
aagctgttctgccgcactgatcagcagagtatctgttctctcttctctgtggacgaacac
aaaggccacgacacggtgtcagctgcagcagagaggactgagaggcagagagaggtggag
gggagtcgactgaacatccagcagagaatccaggacggagagaaggaggtgaagctgctt
cagcaggaggtgcaggccgtcaatggctctgctgataaagcagtggaggacagtgagaag
acgttcactgagctgatccgtctcatggagaagagaagctctgatgtgaagcagcagctc
agatcccagcaggagagagaagtgagtcgagtcagagagctccaggagaagctggagcag
gagatcagggagctgaagaggagagacgctgagctcaagctgctgtctcacacagaggac
cacaaccagtttctgctcagctacccctcactgccagcccccctcagtgaagctacacac
tcctccagcaccaacatccggcctctgagctactttgaggacgtgacggcgggcctgtca
gcagtcagagacaaactacaggacgccctgagagaggaatggaccaacgtctcatcgact
gaagtggatgttttactgtcagcagcagagcccgcctccagagctgggttcttacaatat
tcacaggagatcactctggatccaaacacagcacacacacagctgttattatctgagggg
agcagaaaagcaacactcatgggaccacatcactcttattctagtcacccagacagattc
actttatatcctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtg
gagtggagaggggaagcagtttgtgtagcagtcgcagacaagaatatcagcagatcaggg
gggggggatgaaagtggatttggaaacaatgacaaatcttggtctttagattgttaccta
aacaggtattcattttgttacaacaatatccaaactcccgtctcaggtcctccgtcctcc
agagtaggagtgtacctggatcacagagcaggtgttctgtccttctacagcgtctctgaa
accatgactctcctccacagagtccagaccacgttcactcagccgctgcattctggagtt
cggctttgttatgttggagccacagttgagttgtgtaaactgaaatag
DBGET
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