Pseudochaenichthys georgianus (South Georgia icefish): 117450790
Help
Entry
117450790 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: RNA binding protein fox-1 homolog 2-like
KO
K14946
RNA binding protein fox-1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117450790
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117450790
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
117450790
NCBI-ProteinID:
XP_033944654
LinkDB
All DBs
Position
8:33138299..33213611
Genome browser
AA seq
458 aa
AA seq
DB search
MLMSTDVASIMLPVSRGVMERDIDTAAGTLANTTGGPGASVRGMKRGDPEPDAQTAAALT
DLPGAECKRPRIDGTTVVDIGQNDEPLNPGYHGYPPHSQGAQDSTGGQEGLVAPPFAAFP
PPPPPQNGLPGAEFVPAAMFAAGVQSPAEVGAGAIVGSPSASPNNNGKTEEVSQGEAGVQ
CGSGDSGGSVGDPSEAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFNERGSK
GFGFVTFETGVDAERAREKLHGTLVEGRKIEVNNATARVMTNKKMVSPFPNGEAALSALP
YAGWKLSPMMGAMYAPEIYASPRFPYSSAAAAATTAAAAFRGAHLRGRGRPVYSAVRAAV
PQPAMPTYPGVVYQDGFYGAADLYGGYPAAAAAAAAAYRYAQPAAVTGATAAAAAYSDSY
GRVYTTDPYHGLNPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcttctataatgctgcccgttagtcggggggtaatggag
agagacattgatacagcagccgggaccctcgctaacacgaccgggggtccgggagcatct
gtccgggggatgaagcgaggagacccggagcccgacgcccagacagcggctgccctgacg
gacctacccggtgcggagtgcaaaagacccaggatagacggcaccactgtggtcgacatt
gggcagaacgacgagccgctaaaccccggttaccatggatacccacctcacagtcagggc
gctcaggattcgacaggaggacaggagggattggtggcccctccctttgcagcgttcccc
cctcccccccctcctcagaacgggctgccaggcgcagagttcgtccccgcggccatgttc
gctgccggggtccaaagcccagcagaggtgggggccggggccatcgtaggcagcccctct
gcctcccccaacaacaacggtaagacggaggaggtgtctcagggtgaggcgggggtgcag
tgtggatcaggagattcaggcggatccgtgggagacccctcggaggccaaagggaccccc
aaacgcctccacgtctcaaacatcccgttccgcttccgggaccccgacctcaggcagatg
tttgggcaatacgggaagattctggatgtagagattattttcaatgagaggggctcaaag
ggtttcggcttcgtgacgtttgagaccggcgtggacgcagagagagcccgggaaaagctc
cacggcacgttggtggaaggtcgtaagattgaggtgaacaatgccacggcccgggtgatg
accaacaagaaaatggtcagcccgtttcctaacggagaggcggccctcagcgcgctgccc
tacgcggggtggaaattgagtcctatgatgggagccatgtacgcacctgagatctacgcc
agtcccaggttcccctactcttcagcagcggcagcagccaccacagcagcagcagcgttt
cgcggggctcacctgagaggccgcggccgacccgtctacagcgctgtgcgagccgccgtg
cctcaacccgccatgcctacataccctggtgtggtgtatcaggatgggttttacggcgct
gcagacttatatggaggttatcctgctgctgctgctgccgcggccgccgcctaccgctac
gcccagccggccgccgtaaccggggcaaccgctgcagccgccgcctacagcgacagttac
ggccgagtgtacactacagacccgtaccacggtttaaatccagccgccgctgcttatgga
gtcggagcaatggccagtttataccgggcaggatacagtaggtttgctccgtactaa
DBGET
integrated database retrieval system
