Pseudochaenichthys georgianus (South Georgia icefish): 117450790
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Entry
117450790 CDS
T09629
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117450790
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117450790
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Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
DUF8400
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
117450790
NCBI-ProteinID:
XP_071060222
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All DBs
Position
8:33095153..33169753
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AA seq
467 aa
AA seq
DB search
MLMSTDVASIMLPVSRGVMERDIDTAAGTLANTTGGPGASVRGMKRGDPEPDAQTAAALT
DLPGAECKRPRIDGTTVVDIGQNDEPLNPGYHGYPPHSQGAQDSTGGQEGLVAPPFAAFP
PPPPPQNGLPGAEFVPAAMFAAGVQSPAEVGAGAIVGSPSASPNNNGKTEEVSQGEAGVQ
CGSGDSGGSVGDPSEAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFNERGSK
GFGFVTFETGVDAERAREKLHGTLVEGRKIEVNNATARVMTNKKMVSPFPNGEAALSALP
YGNAGWKLSPMMGAMYAPEIYAVPGFPYSSAAAAATTAAAAFRGAHLRGRGRPVYSAVRA
AVPQPAMPTYPGVVYQDGFYGAADLYGGYPAAAAAAAAAYRYAQPAAVTGATAAAAAYSD
SYGRVYTTDPYHGLNPAAAAYGVGAMDIALTLQASLYRAGYSRFAPY
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcttctataatgctgcccgttagtcggggggtaatggag
agagacattgatacagcagccgggaccctcgctaacacgaccgggggtccgggagcatct
gtccgggggatgaagcgaggagacccggagcccgacgcccagacagcggctgccctgacg
gacctacccggtgcggagtgcaaaagacccaggatagacggcaccactgtggtcgacatt
gggcagaacgacgagccgctaaaccccggttaccatggatacccacctcacagtcagggc
gctcaggattcgacaggaggacaggagggattggtggcccctccctttgcagcgttcccc
cctcccccccctcctcagaacgggctgccaggcgcagagttcgtccccgcggccatgttc
gctgccggggtccaaagcccagcagaggtgggggccggggccatcgtaggcagcccctct
gcctcccccaacaacaacggtaagacggaggaggtgtctcagggtgaggcgggggtgcag
tgtggatcaggagattcaggcggatccgtgggagacccctcggaggccaaagggaccccc
aaacgcctccacgtctcaaacatcccgttccgcttccgggaccccgacctcaggcagatg
tttgggcaatacgggaagattctggatgtagagattattttcaatgagaggggctcaaag
ggtttcggctttgtgacgtttgagaccggcgtggacgcagagagagcccgggaaaagctc
cacggcacgttggtggaaggtcgtaagattgaggtgaacaatgccacggcccgggtgatg
accaacaagaaaatggtcagcccgtttcctaacggagaggcggccctcagcgcgctgccc
tacggtaacgcggggtggaaattgagtcctatgatgggagccatgtacgcacctgagatc
tacgcagtcccagggttcccctactcttcagcagcggcagcagccaccacagcagcagca
gcgtttcgcggggctcacctgagaggccgcggccgacccgtctacagcgctgtgcgagcc
gccgtgcctcaacccgccatgcctacataccctggtgtggtgtatcaggatgggttttac
ggcgctgcagacttatatggaggttatcctgctgctgctgctgccgcggccgccgcctac
cgctacgcccagccggccgccgtaaccggggcaaccgctgcagccgccgcctacagcgac
agttacggccgagtgtacactacagacccgtaccacggtttaaatccagccgccgctgct
tatggagtcggagcaatggacattgcactcacattgcaagccagtttataccgggcagga
tacagtaggtttgctccgtactaa
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