Pseudochaenichthys georgianus (South Georgia icefish): 117451178
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Entry
117451178 CDS
T09629
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117451178 (rbfox1)
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117451178 (rbfox1)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
117451178
NCBI-ProteinID:
XP_033945227
EnsemblRapid:
ENSPGEG00000008643
LinkDB
All DBs
Position
8:complement(1545643..1846462)
Genome browser
AA seq
425 aa
AA seq
DB search
MQHPGGTCVALPSADTCPQLSCAALTFMYLQQGNQDTPAPPDPSMAQAYPSAQFAPPPQN
SIPEFTASQPHPHSHPHQHPAAMQDYPGVQASVSDHPLNMYQSSQSHEGPSGPEPSSHSV
PDNATQTDEAAQTDSQPSSQTVPESTDSKAQPKRLHVSNIPFRFRDPDLRQMFSQFGKIL
DVEIIFNERGSKGFGFVTFEHSVDADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNP
YANGWKLNPVVSAVYSPEFYAVTGFPYPAASAAAAAAAAAAAVAYRGAHLRGRGRAVYNT
FRAAAPPPQIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTAATAAAYSDSYGRVYAADPY
SHTLTPAATYSVGAMTRKVGAMPTMWGSCCPLSRLVYTGEATAALLPISNTSNLNPTFPQ
DRKCV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcctggaggaacctgcgtggcgttacccagcgcggacacctgtccccagctg
tcctgcgcagccctcaccttcatgtatctacagcagggtaaccaggacacaccggcaccc
ccggacccatccatggcccaggcttacccatcagcccaatttgccccccctccccagaac
agcatcccagagttcacagcttcacaaccccatccacactcccacccgcaccagcacccg
gcggccatgcaggactaccctggggtgcaggcctccgtcagcgaccaccccctcaacatg
taccagtcctcgcagagccacgaggggccgagcggcccggagcccagcagccacagcgtg
cccgacaacgccacacagacagatgaagccgctcagacagacagtcagccttcatcacag
acggtccctgaaagcaccgacagcaaggcccagcccaagagactgcacgtatccaacatc
cccttcaggttcagagacccagacctcaggcagatgttcagccaatttggcaaaatctta
gatgtggaaatcatcttcaacgagcgaggttctaagggttttgggttcgtaacgttcgag
catagcgtggacgccgacagggccagagagaaattacacggaaccgtggtagaaggccgt
aaaatagaggtcaacaatgcaacagcccgagtaatgacaaataagaagactgtcaaccca
tatgcaaatggctggaagttaaatccagtggtcagcgctgtctacagcccagaattctat
gcagtaacaggcttcccctacccagcagccagtgcagcagcagcagcagcagcagcagca
gcagcagtagcgtacagaggagcccacctaagaggtcgaggacgggcggtgtacaacaca
ttcagggcggctgctcccccaccccaaatccccgcgtacggaggtgttgtttaccaggat
ggattttatggtgcagatatttatggtggttacgctgcctacagatatgcccagcctact
gctgccacagctgctgcatacagtgacagttacggacgagtatacgctgccgacccctac
agccacacactcactccagcagccacatacagcgttggtgccatgacgcgaaaagtcgga
gccatgccgacgatgtggggctcgtgctgtcctctctccaggctagtatataccggggag
gctacagccgctttgctccctattagcaacacctccaacctgaacccaaccttcccacag
gacagaaagtgtgtgtga
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