Pseudochaenichthys georgianus (South Georgia icefish): 117452700
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Entry
117452700 CDS
T09629
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03022
Basal transcription factors
pgeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117452700 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
117452700 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117452700 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117452700 (gtf2h2)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117452700 (gtf2h2)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117452700 (gtf2h2)
BRITE hierarchy
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
Motif
Other DBs
NCBI-GeneID:
117452700
NCBI-ProteinID:
XP_033947316
EnsemblRapid:
ENSPGEG00000003031
LinkDB
All DBs
Position
9:complement(6212304..6224248)
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVIESHGQVRLGMMRH
LHVVIDCSRSMDDHDLKPNRLTSTLKLMESFVDEYFDQNPISQLGIITTKNKRAEKLTDL
AGNPKNHIVALKKAVTTLCVGEPSLYNSLNLAIQTLKHMPGHTSREILIVLSSLTTCDPA
NICELIKTLKALKVRVSVIGLSAEVRVCTVLTRETGGSYRVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPPHIIASLTNQDAKPSFSMSHLDSSSGAGLSLGGYFCPQCQAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLAAFTESPVEGLQDDRVCQACQGELKDKTAFTC
PSCRSVFCVECDLFIHDSLHCCPCCLHSQSPT
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagaaccaagcgctgggaagggggctatgagaggacttgggaa
gtgctgaaggaggacgaatctggatccctgaaagccacagtggaggagatcctgttccag
tctaagaggaagagggtgatcgagagccatggacaagtgaggctgggaatgatgcgtcac
ctccacgtggtaattgactgttccagaagtatggacgaccatgacttaaaaccaaaccgc
ctcacctccactctgaagctcatggaatcttttgttgatgagtattttgaccaaaacccc
atcagtcagctgggcattatcaccacaaagaataaacgggctgagaagctgaccgacctg
gcaggaaatccaaagaatcacattgttgctctgaagaaagcagtcaccactttgtgtgtt
ggagagccgtccttatacaactctctcaacctggccatccagacactcaagcacatgcct
ggacatacgagccgggagatcctcatcgtcctcagcagcctgactacatgtgacccagcc
aacatatgtgagctgattaagaccctgaaggctctcaaggtgcgggtgtctgtgattggc
ctgtcagctgaggtccgggtgtgcacagtcctgaccagagagacgggaggctcgtaccgc
gtcatcctggatgagagtcacttcaaggagctgctgatgctgcacgtcaaacctcctcca
gccagctcttcatctgaatgctctttaatacgcatgggttttcctccacacatcatcgcc
tccctcactaatcaggatgccaagccttcattcagcatgtcgcacctggacagcagcagt
ggtgcgggtctgtctctgggaggatacttttgtccgcagtgccaagcaaagtacacggag
ctacctgtggagtgtaaagtctgcggtttgactctggtgtcggcgccccatcttgccaga
tccttccaccaccttttcccgctcgcagcctttacagagagtcctgtggaggggctccaa
gacgacagggtctgtcaagcttgtcaaggggagctgaaagataaaactgcattcacctgt
ccatcgtgtcgcagtgtattctgcgtggagtgtgacctcttcatccatgactcgctacac
tgctgcccctgctgtcttcacagtcagagccccacctga
DBGET
integrated database retrieval system
