Pseudochaenichthys georgianus (South Georgia icefish): 117453186
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Entry
117453186 CDS
T09629
Symbol
itga2.2
Name
(RefSeq) integrin alpha-2
KO
K06481
integrin alpha 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03271
Virion - Rotavirus
pgeo04145
Phagosome
pgeo04510
Focal adhesion
pgeo04512
ECM-receptor interaction
pgeo04810
Regulation of actin cytoskeleton
pgeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
117453186 (itga2.2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117453186 (itga2.2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117453186 (itga2.2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117453186 (itga2.2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117453186 (itga2.2)
04810 Regulation of actin cytoskeleton
117453186 (itga2.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117453186 (itga2.2)
04515 Cell adhesion molecules [BR:
pgeo04515
]
117453186 (itga2.2)
04090 CD molecules [BR:
pgeo04090
]
117453186 (itga2.2)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117453186 (itga2.2)
Exosomal proteins of bladder cancer cells
117453186 (itga2.2)
Cell adhesion molecules [BR:
pgeo04515
]
Integrins
Integrin alpha subunits
117453186 (itga2.2)
CD molecules [BR:
pgeo04090
]
Proteins
117453186 (itga2.2)
BRITE hierarchy
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
117453186
NCBI-ProteinID:
XP_033947975
EnsemblRapid:
ENSPGEG00000005916
LinkDB
All DBs
Position
9:complement(21081107..21097646)
Genome browser
AA seq
1183 aa
AA seq
DB search
MEFIWGNFFFTLVVITDRIWRSQSFNVGTAGAKIFSGPAAEEFGYTVQQATNYEGKWLLV
GAPWSGLTNRKGDVYKCPVSGSRNSCDKLNLQDSVSIPDVRSVNNNMSLGLTLTRMPASN
DLMMCGPLWGQQCGNQVFYPGICARMNPLFQPQPAFSPAIQTCGGPMDIVIVLDGSNSIY
PWAPMTAFLQKLIPALDIGPKKTQVSVIQYAVEPKFELTLNQYTTKDEVLAATSKITQMY
GSSTNTFHAIQYASQWGFDISNGGRPGAAKVMVVVTDGESHDSAFSDTVISDCEAQGITR
FGIAVLGYYIRNDINTDNLIKEIKSIASVPTEKYFFNVSEEAALSTIAGALGSRIFNIEG
TGKGGDNFKMEMSQVGFSAHYSSRQDVMMLGAVGAYAWSGTVVHQKGSKADILPFSAFEG
ILQDRNHSSLLGYSVTTLSDVSTEYFVAGAPRSNHSGQVIVYTVNAQKQSAIIDSERGKQ
IGSYFGSVLCPLDVDRDGVTDLLLVGAPMFMSDMQREEGKVYIFQVTKGILNEQGFLSGP
PPTENARFGMAISAVPDLDLDGYNDIVVGAPLEDKGKGVIYIYNGEKKTLNKQYSQRIFG
SKLDPQLQYFGRSLDSYTDLNDDTIPDISIGAYGKVVQLWSRGVASVTAGASFKPDKINI
FNKPCNINGRKLTCFNTNLCFSAAFRPKKPVGPIDISYTLTLDADLQASRVTSRGLFSQN
NERYLTEKAKISSVPLCLDYQVYVQEAPDFVNSLSLKVEIEQQNADVNPVLDRFSSSAWE
FFIPFTKDCGSDDVCVSDLVLSVKTDTKASSSAPVMVSASNRELSFEVVVKNKKENAYNT
QVLATFSGNLYYSSVFPPTDGVKCASTQTQTVTCQVGYPALKKDEEMKFQMNFEYNLDML
QNQAEVKFEAKSDGKEERPADNKVDISLPVRYDAGIGLSRQSNINFYVADTAVPVVTTVT
SLDDIGPVFNFTVKVSTSSFPVSLMYVTIALPVSTKGGNQLLYVTSVDTQTGGAVSCDSS
GLVDPLKIGLKNHKVSFSEENLRGMEKLDCKTATCEYIKCILKDTEINTDYFVKVKTRIW
SGTFISATYQTIELTSNFDVETSNPDLLIIGLKQLPVVLTVSKPGEKGDVPVGVIAGSVI
GGLLLLALAVGLLWKFGFFKRKYKQLQMEDDDTQSRAHVDEVL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggagttcatctgggggaatttcttcttcactttagtagtcattactgacagaatatgg
cgctcacagtccttcaacgtcggcactgcaggtgccaagattttcagtgggccagctgcg
gaggagtttggctacacggttcaacaagcaacaaactatgaaggcaaatggctcctggtt
ggtgccccatggagtggtttgactaacaggaagggggatgtttacaagtgtccagtctca
gggtccagaaacagctgtgacaagctcaatcttcaagattctgttagtattccagatgtt
agaagcgtcaacaacaacatgagcctgggtttgactcttacccggatgcctgcttctaat
gatttgatgatgtgcggtcctctttggggacagcagtgtggcaatcaggtcttctaccca
ggaatatgtgcaagaatgaaccccctgtttcaacctcaacctgccttctctcctgccatc
cagacatgtggagggcctatggacatcgtgattgtgttggatggttccaacagtatttat
ccttgggctccaatgaccgcgttcctccagaaattaatacctgcactcgacatcgggccc
aaaaaaacacaggtcagtgtcattcagtatgctgtcgagccgaagtttgaactcacactg
aaccagtatacaaccaaagatgaggtgctagctgcaacatccaaaatcacacaaatgtac
ggctcttccaccaacacctttcatgcgatccaatatgccagtcagtggggtttcgatatt
agcaatggagggcgaccaggcgctgccaaggtgatggtagtggtcactgacggggagtct
cacgactcggccttcagtgatacagtcatctcagactgtgaggcacaaggtatcacccgc
ttcggtatcgctgtcctgggttattacatccgaaacgacatcaacacagacaacctcata
aaagaaatcaaatccattgccagtgtacccacagagaagtacttcttcaatgtgtctgaa
gaggcggccctctccaccatcgctggagcattgggaagccgcatcttcaacatagaaggc
actggaaaagggggcgacaactttaagatggaaatgtcccaggtcggattcagcgctcac
tattcaagtcgacaggatgtgatgatgctgggagcagtgggagcctacgcttggagcggc
actgttgtccatcaaaaagggtcaaaagctgacattctccctttctcagcctttgaggga
atacttcaagacagaaaccacagctcactactgggctattctgtcaccacactcagcgat
gtgtccactgaatactttgtggctggtgcacctcgctccaaccactctggacaagttatc
gtctataccgtcaatgcccagaaacaatctgctataatagattctgaaagagggaaacag
attgggtcatactttgggagtgtcctatgccccctggacgtggacagagacggggtgacg
gacctcctgctggtcggagcacccatgttcatgagcgatatgcagagagaggaaggcaag
gtctacatcttccaggtcaccaagggtatactgaacgagcagggattcctcagtggtccc
cccccaacagagaacgctcgttttgggatggctatctctgccgttcctgatctggacctc
gacggatacaatgatattgtagtcggagccccactggaagacaaaggaaaaggtgtcatc
tacatctacaacggggagaagaagacactaaacaaacagtactcacagagaatctttggc
tcaaaactggatcctcagctgcagtatttcggacggtccctcgatagctacacagatctg
aatgatgacacaatccctgacatctccattggagcatatggcaaagtggtgcagctctgg
tccagaggtgtggcatctgtcacggcgggagcttctttcaaacccgataaaatcaacatt
ttcaacaaaccctgtaacattaatggacgcaagcttacatgtttcaacaccaacctctgt
ttcagtgctgcattcaggcctaagaaacccgttggacccattgatatatcctacactttg
actctggacgctgacttgcaggcttcacgggtgacatcaagaggactgttcagtcaaaac
aatgaacgctacctcacagagaaggcaaaaatatcatctgtgcccctgtgtctggattac
caggtctatgttcaggaggcaccagactttgtcaattccctcagtctgaaagtagaaatc
gagcagcagaatgcagatgtgaaccctgtcctcgataggttttcttcaagtgcatgggag
ttctttatccccttcacaaaagactgcggctctgatgacgtgtgtgtcagcgatctggtg
ctcagtgtgaaaacagacacaaaggcgtccagctcagctcccgttatggtcagcgctagt
aaccgagaactgtcatttgaagtggtcgtgaagaacaaaaaggagaacgcgtataacact
caggtcttggccactttctctgggaacctctactactcctctgtcttccctcctacggat
ggagtcaaatgcgcttcaactcaaacccaaactgtcacctgccaagtgggatacccagca
ttaaaaaaagacgaagaaatgaaatttcagatgaattttgaatacaatcttgacatgttg
caaaaccaagccgaggtgaaatttgaggccaagagtgatggtaaagaggaaagaccagca
gacaacaaggtggacatttcacttcctgttcgatatgatgcagggattggtttatcaagg
cagtcaaatatcaatttctacgtggcagacactgcagttcccgtggtaacaacggtgaca
agtcttgatgatatcggcccagtgtttaacttcacagtaaaggtttcaacaagtagcttc
cctgtcagcctcatgtatgtgaccatcgctctgccagtgtccactaaaggtggaaaccag
ctgctctacgtgaccagcgtggacacacaaacagggggagctgtcagctgcgactccagc
ggcctggtcgatcctttgaagatcggactgaagaaccacaaagtgtctttctcggaagag
aacctcagaggcatggagaaactggactgcaagactgcaacatgcgagtatataaagtgc
atcctcaaggacaccgaaataaataccgactactttgtgaaagttaaaacaaggatctgg
agtggcacatttatttcggccacctatcagacgattgagttgacctccaactttgatgtg
gagacctccaaccctgacctgctcatcatcggcctcaaacagctaccagtggtgctgacg
gtcagtaaacctggagagaaaggggatgttccagtgggagtgatagcaggaagcgtcatt
ggtggactgctgctgttggctctggccgtcggactgctgtggaaatttgggtttttcaaa
agaaagtacaagcagcttcagatggaggatgacgacacgcagagccgcgcacatgtggat
gaagtgctgtaa
DBGET
integrated database retrieval system
