Pseudochaenichthys georgianus (South Georgia icefish): 117454183
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Entry
117454183 CDS
T09629
Symbol
cd40lg
Name
(RefSeq) CD40 ligand
KO
K04389
tumor necrosis factor ligand superfamily member 6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04060
Cytokine-cytokine receptor interaction
pgeo04068
FoxO signaling pathway
pgeo04210
Apoptosis
pgeo04217
Necroptosis
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117454183 (cd40lg)
04068 FoxO signaling pathway
117454183 (cd40lg)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117454183 (cd40lg)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117454183 (cd40lg)
04217 Necroptosis
117454183 (cd40lg)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117454183 (cd40lg)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgeo04147
]
117454183 (cd40lg)
04052 Cytokines and neuropeptides [BR:
pgeo04052
]
117454183 (cd40lg)
04090 CD molecules [BR:
pgeo04090
]
117454183 (cd40lg)
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117454183 (cd40lg)
Cytokines and neuropeptides [BR:
pgeo04052
]
Cytokines
Tumor necrosis fators
117454183 (cd40lg)
CD molecules [BR:
pgeo04090
]
Proteins
117454183 (cd40lg)
BRITE hierarchy
Motif
Pfam:
TNF
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
117454183
NCBI-ProteinID:
XP_033949202
EnsemblRapid:
ENSPGEG00000001581
LinkDB
All DBs
Position
10:15798247..15800146
Genome browser
AA seq
226 aa
AA seq
DB search
MINTYQTSVAAPPVPPRLSRSQQVLFPAPSQGHSKSLLRFLAGVVMLHLFLSVGGFIYLK
QNDTMHPSQLPSDKGKFAYRSSGKQETSNRALARMVVRQQTAHKSGYLQWDMDHSVLKSV
RYYHNMWLTIEQPGDYYVYSRVTFSKGDPKLPLVSMVKLRESEKIEEKIVMQAYCNLDSS
SVSQLCTATQGELLTLEKGNQLSVWLPDLSLVNYEEGATTFGIFRL
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacacttaccagaccagtgttgctgcaccgccggtgcctccacgcctcagccgg
tcccaacaggtcctcttcccggctccatcacaaggccacagcaagtctctcctcaggttc
ctggccggtgtagtgatgctgcacttattcctttcagtcggaggattcatctacctgaag
caaaatgacacaatgcatccatcccagctcccatcagataaaggaaaatttgcctatcgc
tcatcaggaaagcaggaaacatcaaacagagccctggcccgcatggtagtccggcagcaa
acagctcataaatcgggttatctccagtgggacatggaccactcagttttaaagagcgtc
cgttactaccacaacatgtggttgaccatcgagcagcctggcgactactacgtctactcc
agggtgaccttctccaagggcgaccccaagctgccgctggtcagcatggtgaagctgagg
gagagtgagaagatagaggagaagatagtgatgcaggcgtactgcaacctggacagcagc
agtgtgtctcagctgtgcacggccacacagggagagctgctcacactggagaaagggaac
cagctcagtgtctggttaccagacctttcactggtgaactacgaggagggggccacaacc
tttgggattttcagactgtag
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