KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117454183
Entry
117454183         CDS       T09629                                 
Symbol
cd40lg
Name
(RefSeq) CD40 ligand
  KO
K04389  tumor necrosis factor ligand superfamily member 6
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010  MAPK signaling pathway
pgeo04060  Cytokine-cytokine receptor interaction
pgeo04068  FoxO signaling pathway
pgeo04210  Apoptosis
pgeo04217  Necroptosis
pgeo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117454183 (cd40lg)
   04068 FoxO signaling pathway
    117454183 (cd40lg)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    117454183 (cd40lg)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    117454183 (cd40lg)
   04217 Necroptosis
    117454183 (cd40lg)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117454183 (cd40lg)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pgeo04147]
    117454183 (cd40lg)
   04052 Cytokines and neuropeptides [BR:pgeo04052]
    117454183 (cd40lg)
   04090 CD molecules [BR:pgeo04090]
    117454183 (cd40lg)
Exosome [BR:pgeo04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   117454183 (cd40lg)
Cytokines and neuropeptides [BR:pgeo04052]
 Cytokines
  Tumor necrosis fators
   117454183 (cd40lg)
CD molecules [BR:pgeo04090]
 Proteins
  117454183 (cd40lg)
Motif
Pfam: TNF BiPBP_C
Other DBs
NCBI-GeneID: 117454183
NCBI-ProteinID: XP_033949202
EnsemblRapid: ENSPGEG00000001581
LinkDB
Position
10:15798247..15800146
AA seq 226 aa
MINTYQTSVAAPPVPPRLSRSQQVLFPAPSQGHSKSLLRFLAGVVMLHLFLSVGGFIYLK
QNDTMHPSQLPSDKGKFAYRSSGKQETSNRALARMVVRQQTAHKSGYLQWDMDHSVLKSV
RYYHNMWLTIEQPGDYYVYSRVTFSKGDPKLPLVSMVKLRESEKIEEKIVMQAYCNLDSS
SVSQLCTATQGELLTLEKGNQLSVWLPDLSLVNYEEGATTFGIFRL
NT seq 681 nt   +upstreamnt  +downstreamnt
atgatcaacacttaccagaccagtgttgctgcaccgccggtgcctccacgcctcagccgg
tcccaacaggtcctcttcccggctccatcacaaggccacagcaagtctctcctcaggttc
ctggccggtgtagtgatgctgcacttattcctttcagtcggaggattcatctacctgaag
caaaatgacacaatgcatccatcccagctcccatcagataaaggaaaatttgcctatcgc
tcatcaggaaagcaggaaacatcaaacagagccctggcccgcatggtagtccggcagcaa
acagctcataaatcgggttatctccagtgggacatggaccactcagttttaaagagcgtc
cgttactaccacaacatgtggttgaccatcgagcagcctggcgactactacgtctactcc
agggtgaccttctccaagggcgaccccaagctgccgctggtcagcatggtgaagctgagg
gagagtgagaagatagaggagaagatagtgatgcaggcgtactgcaacctggacagcagc
agtgtgtctcagctgtgcacggccacacagggagagctgctcacactggagaaagggaac
cagctcagtgtctggttaccagacctttcactggtgaactacgaggagggggccacaacc
tttgggattttcagactgtag

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