Pseudochaenichthys georgianus (South Georgia icefish): 117455098
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Entry
117455098 CDS
T09629
Symbol
tap2a
Name
(RefSeq) antigen peptide transporter 2a
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo02010
ABC transporters
pgeo04145
Phagosome
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117455098 (tap2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117455098 (tap2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117455098 (tap2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117455098 (tap2a)
Enzymes [BR:
pgeo01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
117455098 (tap2a)
Transporters [BR:
pgeo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
117455098 (tap2a)
BRITE hierarchy
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
AAA_16
MFS_1
RsgA_GTPase
AAA_30
AAA_29
AAA_21
Ribosomal_S9
Motif
Other DBs
NCBI-GeneID:
117455098
NCBI-ProteinID:
XP_033950351
EnsemblRapid:
ENSPGEG00000011536
LinkDB
All DBs
Position
11:9171390..9181028
Genome browser
AA seq
717 aa
AA seq
DB search
MAGGTVFRKVFALILAVFVDISFVHLLGLVVNHRVFGHLARLWVSAALRCLALTAVTLLS
LRDVRPLVFRVIFTHSLLPAVLETGTRVLYHEETQCGMLADLRCWLMCAGASLAGALFWE
ITIPDTEDAAAGKEKRQEARVLFVRVLHLYRPDSLLLLGGLVFLTLAVICEMFIPFYTGR
VIDILGSQYQHTEFISALLFMGLYSLGSSVSAGCRGGLLLCAISAFTCRVKAKLFGALTK
QEIGFFEAIKTGEITSRLSKDTNLMGRTVALNVNVLLRTFIKTMGMISLMMNLSWKLTFI
VLMETPITGLIQNIYDTHYQRLSLAVQDSMALSNEVANEVVSSIHAVRSFNTEKQEAQRY
DDCLMKTHTLRTRRDTVRAVYLLAQRLTGLVMQVLMLYYGRLFIRSGQMTTGNLVSFILY
QSELGDNIRTLTYIFGDMLNSVGAAGKVFEYLDRKPQVSTEGKLKPDQLTGDVSFRGVNF
AYPAYPNKRVLQDFSLELKAGQMTALVGPSGEGKSTCVSLLERYYEQQDGEILLDNEPLK
SYDHCFLHKKIAVVSQQPVLFSGSIRDNIAYGVAECSLDEIQEAARKANAHDFINQLEKG
YDTEVGEGGGQLAQSERQRIAIARALVRQPQVLILDEITSSLDPESDNKIQQALASCPNQ
TLLVIAHRLKTIEKAHQIVLIGDGHVQERGTHQELMEKKGRYYKLREKLFTEGNSPQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcggtacagtatttcgaaaagtctttgctttgattttagcagtttttgtcgac
atttccttcgttcatttattggggttagtagtgaaccacagggtgtttggacatcttgcg
cgactctgggtgtctgcggctctccggtgtttggcactgactgctgttactctgctcagc
ctcagagatgtccgtccattagtgtttagggttatatttacacacagtctgctgcctgcg
gtgctggagaccgggaccagagtgctctaccacgaggagacccagtgtggcatgttggcg
gatctgcgctgctggctgatgtgcgccggggcgtcgctggctggggctctgttttgggag
atcaccatcccggacaccgaagatgcagccgccggtaaagagaagaggcaggaagcccga
gtgctgtttgtgagagtcctgcacctgtacagacccgactctctgctgctgctgggagga
cttgtgttcctgacgctggctgttatctgtgagatgttcatcccgttctatactgggaga
gttattgacatccttggcagtcagtaccagcacactgaattcatatctgcactcctcttc
atggggctgtactctctgggaagctctgtgagtgcaggctgcagaggaggtctcttactt
tgtgccatcagtgccttcacatgcagagtgaaagccaagctgtttggggctttgaccaaa
caggaaattggattctttgaggccataaagacaggtgaaattacatccaggttgtcgaaa
gacaccaacttgatggggagaacagtggctctgaatgttaatgtgctgctaaggacattc
atcaagacaatgggcatgatctccctgatgatgaatctgtcatggaagctcacattcatc
gtgttgatggagacgcctatcactggccttattcagaacatctatgatactcactaccag
cgcctgtcccttgcggtgcaggactcaatggctctgtcaaatgaagttgcgaatgaggta
gtatccagtattcatgcggtccggagctttaacacagaaaaacaagaggctcagcgctat
gacgactgcctgatgaaaacacacacactgaggacccgccgggacactgtcagggccgtt
tacctgctcgcacagaggttaacagggctggtcatgcaggtcctcatgttgtattatggt
cggctgttcatccggagtggacagatgaccactggcaacctggtttccttcatcctctac
cagtcagaacttggagataacatcaggacacttacctacatctttggtgatatgctaaac
tcggtgggggctgctgggaaggtctttgagtacctagaccgaaagcctcaggtcagcacg
gagggaaaactcaaaccggatcagctgacaggagacgtcagcttccgtggcgtcaacttt
gcctatccagcataccccaacaaaagagtgctgcaggacttctctttggagctgaaggca
ggtcagatgacggcactggtgggtccatccggagaagggaagagcacctgtgtgagtctg
ctggagcggtactatgagcagcaggatggagaaatcctattggacaatgaaccactgaag
tcttatgaccactgtttcctccacaagaagattgcagtggtgagccagcagcctgtgctc
ttctcaggctccatcagagacaacatcgcctacggggttgctgaatgctcattggatgag
atccaggaagcagcacgcaaagccaacgcccatgacttcattaaccaactggagaaagga
tatgacacagaggtgggtgagggtggcgggcagttagcccaaagcgagaggcagcggatc
gccattgctcgagctctggtcagacagccacaggtcctcattctggatgaaattaccagc
tctctggaccctgagagcgacaataagattcagcaggccctggctagttgtcccaaccag
accctgctggtgatcgctcacaggctgaagaccattgagaaggcccatcagattgtcctg
atcggggacggccatgttcaggagcgagggactcaccaggaactgatggagaagaagggg
agatactacaaactgagagagaagctgttcaccgagggaaactcccctcaatga
DBGET
integrated database retrieval system
