Pseudochaenichthys georgianus (South Georgia icefish): 117457676
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Entry
117457676 CDS
T09629
Symbol
cxcr5
Name
(RefSeq) C-X-C chemokine receptor type 5
KO
K04190
C-X-C chemokine receptor type 5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117457676 (cxcr5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pgeo04030
]
117457676 (cxcr5)
04050 Cytokine receptors [BR:
pgeo04050
]
117457676 (cxcr5)
04090 CD molecules [BR:
pgeo04090
]
117457676 (cxcr5)
G protein-coupled receptors [BR:
pgeo04030
]
Rhodopsin family
Chemokine
CXC Chemokine
117457676 (cxcr5)
Cytokine receptors [BR:
pgeo04050
]
Chemokine receptors
CXC Chemokine
117457676 (cxcr5)
CD molecules [BR:
pgeo04090
]
Proteins
117457676 (cxcr5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
117457676
NCBI-ProteinID:
XP_033953764
LinkDB
All DBs
Position
13:complement(12879694..12882568)
Genome browser
AA seq
366 aa
AA seq
DB search
MATNTIAVYELGDNDNSENYTDYVYDNKPMVCDDDDGIGLRVFHAVFQPVLYSLIFLLGV
AGNGLMITILLRRWRRLRITEIYLLHLALSDLMLLLTLPFDIVENAAGWLFGEFLCRLMG
LVQTLNLYCGSFLLACIGFDRYLAIVHAIPSMQSRRPRTVHLTCFSLWLLCLGLSIPNAA
FLSVGGNNTNTPILFCSHHLHLIHAHNWVLTKRVLDHLCFFLPLAVMSYCYTAVAVTLCN
SQKSNAKQRAIRLALLVTLVFFFCWLPYNITLLITTLGDLEVIKYENCTSYDLVQPVLDV
TKSIGLSHCCLNPFLYAFVGVRFRNELIKLLCQMGCSWVCLPFMRAQGHSRPSTSDGGLT
SSNILI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaacaccattgctgtttatgagctgggagacaatgacaattctgaaaattac
acagactacgtttacgacaacaagcccatggtctgtgatgatgatgatgggatcggcctg
cgggtgtttcatgccgttttccaacccgtgctgtacagcctgatcttcctgctgggtgta
gcaggaaatggcctgatgataaccatcctcctgcgacgttggcgccgcctgcgcatcaca
gagatctacctgctgcacctggccctgtctgacctcatgctccttctcacattacccttt
gatattgttgagaatgctgctggctggctgtttggggagtttctctgcaggctgatgggt
ctggtgcaaaccctaaacctctactgtgggagtttccttctggcttgcattggctttgat
cggtatttggccattgttcatgctattcccagcatgcaaagtcgacgtccgagaactgtg
cacctgacatgcttttcattgtggctgctctgtttggggttatcgatacccaatgctgct
tttctttctgtggggggaaacaacacaaacacacctatactcttctgttcccatcatctt
caccttatccatgcccacaactgggttttgactaaaagagtgttagatcatctttgcttt
ttccttcctctcgctgtcatgagctattgttacacagcagtggcagttactttgtgcaac
agtcagaaaagcaacgcaaagcaaagagcaattcgactggctttactcgtcacgctcgtc
tttttcttctgttggctaccatacaatatcaccttgctgatcacaactttgggcgacctg
gaggttatcaagtatgaaaactgtacttcttatgacctagttcagccggtgcttgatgtg
acaaaaagcatcggcctctcacactgttgcctgaacccgttcttgtatgcctttgttggg
gtgcggtttcgcaatgagctgatcaagttactgtgtcagatgggctgcagctgggtttgt
cttcctttcatgagagctcagggtcacagccgaccatccacttctgatggaggattaact
agcagcaacatcctcatctaa
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