Pseudochaenichthys georgianus (South Georgia icefish): 117458726
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Entry
117458726 CDS
T09629
Symbol
ftr83
Name
(RefSeq) finTRIM family, member 83
KO
K12006
tripartite motif-containing protein 16
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117458726 (ftr83)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117458726 (ftr83)
BRITE hierarchy
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
Prok-RING_4
zf-RING_6
PMEI
CATRA-C
DUF4407
DUF5344
Motif
Other DBs
NCBI-GeneID:
117458726
NCBI-ProteinID:
XP_033955251
EnsemblRapid:
ENSPGEG00000024468
LinkDB
All DBs
Position
14:26493972..26503634
Genome browser
AA seq
576 aa
AA seq
DB search
MSSEQEDCHLCKEYLRDPVSIPCGHIFCAVCLKTYWDHADHTGSYMCPQCRVTYNKRPTP
RRMGGSRQSTIQRNSEPFPPPPPSPDYNYAGPQDVGCDICIGKKHKAMKTCLMCLASYCE
KHLKPHYESNTFKRHKLVDEIGHLDRQICPQHQKGLELFCRTDQMCICVLCTVKEHKGHD
MVSAEQERAEEQQRLGATQAEIQEKIHDRLKQMEEMKQAVDTLKSSAHTALQECEKMFAD
MIRSIERMQQEMMKLISSNKRAALSNAEGHVERLSHEISDLKRRDNEITQLSRTEDHIHF
IQSFHMLIAQTEAEELPTVSVNPYFTFGPVTKAVSEMKQHLNEFSNEELVKVAKAVNKMT
FCQLEDSKKKQAKSIKSEEATAVQVYKSVPMQEPQHRDDFMRYACQLTLDSNTAYRQLHL
SRANRKAVLKRDPQTYGDHPARFDSLPQVLCKENLSGGPYYWEVDWSGEGAAIGVTYKGI
KRTGYGDNSRIGYNRKSWSLFCSDASYSARHSKDQIEINAPYSSRIGVFLDHEGGTLAFY
GVGETMSLIHRFKASFAEPVFPGFWVWYESGITLIQ
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgaacaggaagactgccacctctgtaaggagtacctcagggaccccgtgtcc
atcccatgtggccacatcttctgcgccgtgtgcctgaagacctactgggaccatgccgac
catacaggctcgtacatgtgcccgcagtgcagggtcacctacaacaagaggcccaccccg
agacgcatgggaggctctcgccaatccaccatccaacgcaacagcgagcccttcccacct
ccccctccgtcccctgactacaactacgcgggaccccaggatgtaggttgtgacatctgc
attggaaagaagcacaaagccatgaagacctgcctgatgtgtctggcctcgtactgcgag
aagcatctgaagccccactacgagtcaaacactttcaaaaggcacaagctggtggatgag
atcggccacctggacaggcagatctgtccgcagcatcagaagggactggagctgttctgt
cgcactgaccagatgtgcatctgtgtgctgtgtacagtgaaggagcacaaaggtcacgac
atggtgtctgcggagcaggagagggcggaggagcagcaacggttgggcgccacccaggca
gagatccaggagaagattcatgaccgactcaagcagatggaggaaatgaaacaagctgtg
gacacactcaagagctctgcccacacagcactgcaggaatgtgagaagatgtttgccgac
atgatacgctccattgaaaggatgcagcaagagatgatgaagctgatctcatccaacaag
agagcagcgctcagcaacgcagagggccacgtggagcgtctgagccatgagatctctgat
ctgaagaggagggacaacgagatcacccagctgtcccgcaccgaggaccacatccacttc
atccagagcttccacatgctgatagcccagacggaggcggaggagctgcctacagtgagc
gtcaacccctacttcaccttcggcccagtcactaaggccgtctctgagatgaaacagcac
ctgaacgaattcagcaacgaggaactggttaaagtggccaaagcagttaacaaaatgacc
ttctgccaactggaggattccaaaaagaaacaggcaaaatcaatcaaaagtgaagaagcc
accgccgtacaagtgtacaagtccgtgccaatgcaggaacctcagcacagggacgacttc
atgagatatgcctgccagctgactctggactccaacacggcctacagacagctccacttg
tcccgagcgaacaggaaagctgtcctcaagagagacccccaaacctacggtgatcacccc
gccaggttcgactccctgccccaggtcctgtgtaaggagaatctttctggaggaccgtac
tactgggaggttgactggagtggagagggggccgccatcggggtcacctacaaaggcatc
aaacggacgggctacggagacaactcccgcatcggctacaaccgcaagtcctggagcctg
ttctgctctgatgccagctactccgcccgccacagcaaagaccagatagagatcaacgcc
ccctactcatcccgtataggggtgttcctcgaccacgaaggcggtaccctcgctttctac
ggagtgggggaaaccatgtctctcatccaccgcttcaaggcctcctttgccgagcccgtc
ttcccaggcttctgggtttggtacgagtcaggcattaccctcatccagtag
DBGET
integrated database retrieval system
