Pseudochaenichthys georgianus (South Georgia icefish): 117459565
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Entry
117459565 CDS
T09629
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117459565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117459565
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
117459565
BRITE hierarchy
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
117459565
NCBI-ProteinID:
XP_033956334
EnsemblRapid:
ENSPGEG00000022200
LinkDB
All DBs
Position
15:complement(15998062..16022833)
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AA seq
581 aa
AA seq
DB search
MLPSRVGSAPSGNGSATGRGNTGHGSGVVGSGIRPVLVRAGQALAGVESIGRQGERDAVG
MLGANGPGGSRGVRPGNGTGVTTLQPAVQGNMVGLHQGGMPHGARFEERDGAPLCSGSDN
DSDSGDDDDPVGSLGDSRRGVKRERGEMEAAVSGQDVGMPPGGYGMVPGGVAGAKPGKKT
RGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATR
KLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESESMGDTK
DTLKPTFTVASLPGSAQCTVPTTSTTMQVSSGPSFPITNYLAPVSASSNISANGTVLKTT
SSGVMQLPGGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQASQHQQGQQAVFRFP
AAVSLSGAGLPQQLQAIQVHHNTTSNSDGSLDISHTSSNSTATVSLPATIVTSSMPTSVA
GHMMYPSPHTVMYASAPTLSDGSLAVLNAFSHGTSAMQVHGQGQDSGVPQVFLTAPQGTV
QIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDAVQNSKD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccgggttggatcggcaccatctggaaacggctcagctacaggcagggga
aacacgggacacggttcgggggttgtcggaagcgggattcgtcccgtgttggttagagca
gggcaagctttagcaggggtcgagagtatcgggagacagggggagagggacgccgtcggg
atgctaggggctaatgggccagggggttcgagaggtgtgagacccgggaacgggaccggg
gtgaccaccctgcagcctgccgtgcagggcaacatggtggggctacaccagggaggtatg
cctcacggagccaggttcgaggagagagatggcgctcctctgtgcagcggctcggataat
gactcggactccggagacgatgatgacccagtgggttcactcggggacagcaggagaggg
gtgaagcgggagagaggagagatggaggctgcagtgtcggggcaggacgtgggcatgcct
cccgggggttacggaatggtgcccggcggggtcgcaggggcgaagccggggaagaaaaca
cgtgggcgagtgaagataaagatggaatttattgacaacaagttacgacgttacaccacc
ttcagcaagaggaagaccggtataatgaaaaaggcgtatgaactctccaccttgacggga
acccaggtactgctgctcgtggccagtgaaacgggtcacgtctacacttttgcaacgcgc
aaactccaacccatgatcacgagtgaaacgggcaaagctctgatccaaacgtgcctcaac
tcaccggactcgccgccacgctccgacccctccacggaccagcgcatgagcgcgacgggc
ttcgaggagacggatctcacctatcaggtgtctgagtcggagagcatgggcgacacaaag
gacacactgaagcccacgttcacggtggccagcctgccgggcagcgcccagtgcacggtg
cccaccacctccaccaccatgcaggtgagcagcgggccctcgttccccatcaccaactac
ctggcgcccgtctcggccagcagcaacatcagcgccaacggcaccgtcctgaagaccacc
agctcgggggtcatgcagctgcccggcggcttcaccttcatgcccgcaggcactcctctc
ccccccggcacccccaccattcctctgagccagctgcagcagcactccctggccctgcag
gggcagcatgggcaggcctcccagcaccagcagggacagcaggctgtcttccgcttccct
gctgctgtctccctctcaggagcaggcctcccccagcagctccaggccatccaggtacac
cacaacaccacctccaacagcgacggcagcctcgacatctcccacacctcctcaaactcc
accgcgacggttagtctcccagcaaccatcgtcacctcgtctatgccaacatctgttgcg
ggtcacatgatgtaccccagcccgcacacagttatgtacgcctctgcgcccacgctgtcc
gacgggagtctcgctgtgctcaacgccttctcgcacggcacctcggccatgcaggtccac
ggacagggccaggactcaggtgtcccgcaggtgttccttacagcaccccaaggcacggtg
cagatccctgtctcagcggtgcagctacacccaatggtgattggtcaacagtcgagcggc
agcagcagtaacttgacggagctccaggtggtcaacttggacgcagtacagaactcaaag
gactga
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