Pseudochaenichthys georgianus (South Georgia icefish): 117460545
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Entry
117460545 CDS
T09629
Name
(RefSeq) sialoadhesin-like
KO
K06467
CD22 antigen
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117460545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pgeo04090
]
117460545
04091 Lectins [BR:
pgeo04091
]
117460545
CD molecules [BR:
pgeo04090
]
Proteins
117460545
Lectins [BR:
pgeo04091
]
I-type lectins (Siglecs)
117460545
BRITE hierarchy
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_7
V-set
DUF2808
Lysis_col
Motif
Other DBs
NCBI-GeneID:
117460545
NCBI-ProteinID:
XP_033957919
LinkDB
All DBs
Position
16:complement(34121487..34130452)
Genome browser
AA seq
739 aa
AA seq
DB search
MTGALKVFLLLLQGSLCVTFEITMPLSIDGLTGSCVKVPCTFDFNSKFDGDLDDSCKAIW
IRGGTGGTVVFDSSLTGVQASGNLTGNLLNKECTTIFYNMPLSHSDNYYFRIQCENKLKG
TYPTGVRITTQISLDQPTITPPTLEVEEGALVTLNCTAVAPCPILPPDLTWTPRIGDIEE
KQESESMVSVMNFTSSYLHNGQNFSCTALYKPQAGNTDPRFEKFMTLHVLFSNISSPPKS
TSVSYSATVQEGSLVNLTCDGNANPAVYTWYKVNGGQVTDVGSGKRFSTTVSEVDKQFYC
KVSNRYGTQNSSITQIDVQFPPKETTIITQHKGPLWEGSSVSLLCKSRANPPVTNYTWYK
GDEEEKEAGSSLVLKYVKPSSSGDYYCAAKNEHGDQNSTLIRLDIQYLPKNTSVSVDPSG
PVQDGSSVTLTCTSIANPAAVNFTWFRAAGREEKVMGSERDLTFNVTKLSEDQYYCEALN
VHGPGTSERVSFDVTFPPEILSSSRCIKISSMIRCSCYSQGNPPPSLVWKLAGEPVNHSA
AIPIREESLGNVGMKSIITLYDLDEDTLSLVCLSINSLGFDSFAFNMSLSKTEQGFHSLS
FGIGFVVAALGILLVCVPLLIIYYRKGKVISSSDKGKAETCNPVVTDAFNSSKVDVIYAN
KAFLEEREVVEEEPLHYVNVDFAKLQAHSKGKPGEGEIRGLDSKTEYAEIRLQSRGSIGG
DAEEEENVFDTQLEQEKTP
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtgctttaaaggttttcctccttctccttcaaggtagcttatgcgtgacgttt
gaaatcaccatgcctctgagtatagatggactaactggatcctgtgtgaaggtcccctgc
actttcgacttcaactcaaagtttgatggagatctggatgattcctgcaaagcaatttgg
atcagaggaggcacaggcggaacagttgtgtttgattccagcctcactggagttcaggca
agcggaaacctcacagggaacctgctgaacaaggagtgcaccaccatcttctacaacatg
ccactgtcccattctgacaactactacttcaggattcagtgtgaaaacaagctgaaaggc
acctatccaacaggagtccgtatcaccactcaaatttcactggaccaacctaccataact
ccacctacactggaggtagaagagggggctctggtgacgctgaactgcacggctgtagct
ccgtgtcccatccttcccccagatctgacttggacccccaggataggtgacattgaggag
aaacaggaatctgaatccatggtctcagttatgaacttcacctcttcttacctccacaat
ggacagaatttttcgtgcaccgctctctacaaaccacaagctggcaacaccgaccctcgg
tttgaaaagtttatgaccctccatgttctattttcaaatatctcttctcctccaaagagc
acatcagtcagctactctgctacagtgcaagagggcagcttggtgaatctgacctgcgac
ggcaatgccaatccagctgtgtacacttggtacaaagtgaatggaggtcaggtgaccgat
gtgggttcggggaaaaggttttcaaccactgtgtcagaagttgacaaacaattttactgt
aaagtcagtaacagatacgggacccagaactcatccatcactcagatagacgtacaattt
cctcccaaggaaactacaataatcactcagcataaaggtccactttgggagggcagctct
gtttccctgctttgcaaaagccgggccaacccacctgtgaccaactacacctggtacaaa
ggtgatgaagaggaaaaggaggctggatcaagtttggttttaaaatatgtcaaaccaagc
agcagtggtgactactactgtgcagcaaaaaatgagcatggggaccaaaattcaacactg
attcggctggacattcagtatctccctaagaacacctcggtgtctgttgacccctctggt
ccggtgcaggacggcagctctgtaactctgacctgcacaagcattgccaatccagcagca
gtgaacttcacctggttcagagcggctggaagagaggagaaggtgatgggctctgagaga
gacctcaccttcaatgtgaccaaactctcagaagatcagtattactgtgaagctctgaat
gtccacggacctggcacctcagagcgtgtcagctttgacgtcacatttcctccagagatc
ctgtcttcttcccgttgcatcaagatttcatccatgatccgatgttcctgctacagccag
gggaacccgcctccctccctggtttggaagttggccggagagcctgtcaatcactctgct
gccatcccaatcagggaagagtccctggggaacgtgggcatgaagagcatcatcaccctg
tacgatctggacgaagacacgctctctctagtctgcctcagcatcaactcactgggcttt
gacagttttgcgtttaacatgtcgcttagcaaaactgagcaaggcttccactcgttgtct
tttgggatcggttttgtagtggcagctctggggattctgctggtgtgtgtaccgctgctg
ataatctactaccggaaaggaaaagtcatctcttcctcggacaagggaaaggcggagaca
tgcaaccctgtagtgactgatgcgttcaactcttcaaaagtggatgtgatttatgctaat
aaagcttttctggaagagagagaagtagttgaggaggaacctctccattacgtcaatgtg
gactttgctaaactgcaggcccattcaaagggtaagcctggagaaggggagattagaggc
ctggactcaaagacggagtatgctgagatccgtctgcagtccagaggaagcattggagga
gatgcagaggaagaagagaacgtttttgacactcaattggaacaagagaagacaccttag
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