Pseudochaenichthys georgianus (South Georgia icefish): 117460837
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Entry
117460837 CDS
T09629
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117460837 (rbfox1l)
Spliceosome [BR:
pgeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117460837 (rbfox1l)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
117460837
NCBI-ProteinID:
XP_033958322
EnsemblRapid:
ENSPGEG00000003915
LinkDB
All DBs
Position
16:29797193..29810564
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AA seq
382 aa
AA seq
DB search
MLSSPTVILQPYGLPVYPQATTCYPSLVQGGPGQEAGPGQDPNLSQVYAPPPSYPPPGQC
PPTSVGRLPLEFTSAHPGSEYAEHPQLRIYQGPQLEGAEVLTSSHAEDGLVAVNSDPLSV
SSECGAGDGSDEEGSNKAQPKRLHVSNIPFRFRDPDLRQMFGQFGTILDVEIIFNERGSK
GFGFVTFESAGEADRAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNSEVPASGWKM
NPVMQAMYAPELYTDPFVMAGFPYPMAAPTLAYRGSALRGGRGRAVFSTIRSAAAAPTAV
PGYPGMVYQDGLYGAEVYGGYPAAYRVAQSASPATATYSDGYGRVYTTSADPYHHSVGPT
TTYGVGTMASLYRGGYNRFTPY
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctctcctcgcccactgtgattctccagccctatggacttcctgtctacccacaggca
accacatgctaccccagcctagttcagggaggccccggtcaggaggccggccccggtcag
gaccccaacctgtcccaggtctacgcccctcctccctcatacccccccccagggcagtgt
ccacccacatctgtgggcagactgcctcttgaattcacctctgcacaccccggctcagag
tacgctgaacacccccagctcagaatctaccaggggccccagctcgagggggccgaggtt
ctgacgtccagccacgcggaggatggtttggtcgctgtgaactctgaccccctgtcggtg
tcatcagagtgcggggcaggagatggaagtgacgaggaggggtccaataaggcccaaccc
aaacgcctccacgtctccaacatcccgttccgcttcagagacccggacctccgccagatg
ttcgggcaatttgggacgatccttgatgtagaaattatcttcaatgagagggggtccaag
ggctttggcttcgtcacattcgagagtgcaggtgaggcggaccgagccagagaaaagctg
aacgggacgattgtggaggggaggaagattgaggttaataatgcaaccgcaagagtagta
accaagaagccccagacgccgcttgtaaacagtgaagttccagcttctggatggaagatg
aaccccgtcatgcaggcgatgtacgcacctgaactctatacagatccctttgtaatggcc
ggtttcccctatcccatggctgctcccacgctggcgtaccgaggctctgcgctgcggggg
gggcgaggccgcgccgtcttcagcaccatccgctctgctgccgccgcgcccactgccgtg
cccggataccccgggatggtgtatcaggatggactgtatggagcagaagtctatggtggc
tatcctgcagcttacagagtggctcaatcagcgtctcctgccacggcaacctacagtgac
ggatacggacgtgtttatacgacatctgcggacccctatcaccactcagtcggaccaaca
acaacatatggcgttggtacaatggccagtttgtacagaggaggatataaccgcttcacc
ccgtactga
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integrated database retrieval system
