Pseudochaenichthys georgianus (South Georgia icefish): 117460996
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Entry
117460996 CDS
T09629
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117460996
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117460996
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-Nse
zf-RING_10
WDCP
SseC
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117460996
NCBI-ProteinID:
XP_033958559
LinkDB
All DBs
Position
16:complement(37111917..37114148)
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AA seq
562 aa
AA seq
DB search
MAQKGVQLDRETFSCPICLDLLKDPVATPCGHSYCMKCITGFWDGEDEKKLHSCPQCRQS
FTPRPVLLKNTMLAALVEELKKTGLQAAPADLCYAGAGDVACDFCTGRKLRACKSCLQCV
ASYCDQHLQPHYELPVFKKHKLVEPSKKLQENICSRHDEVMKLFCRTDQQSICSLCSVDE
HKGHDTVSAAAERTERQRELEGSRLNIQQRRCCIDRIQDGEKEVKLLQQEVEAVNGSADK
AVEDSEKTFTELICLVEERSSDVKQQLRSQQEREVSRVRELQEKLEQEISELKRRDAELE
LLSHTEDHNQFLLSYPSSLPAPLSEATHSSSTNIRPLSYFEDVTAALSAVRDKLQDALRE
EWTNVSPTEVDVLLSAAEPATRAGFFRYSQEVTLDPNTAHTQLVLSEGSRKATLIEQLQS
YSNHPDRFTEWPQVLSREGLTGRCYWEVEWRGLAVYVAVSYKNISRAGRESLFGLNDKSW
SLVCNQNSYRFSYNSIHTPVSGPPSSRLGVYLDHRAGVLSFYSVSETMTLLHRVQTTFTQ
PLHAGVYLYGDNGDTAEFCKLK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttctcttgtcccatctgtctggat
ctactgaaggatccggtggctactccctgtggacacagctactgcatgaagtgtattaca
ggcttctgggacggagaggatgagaagaagctccacagctgccctcagtgcaggcagagc
ttcacaccgaggcctgtcctgctgaagaacaccatgttagcagctttagtggaggagctg
aagaagactggactccaagctgctcctgctgacctctgctatgctggagctggagatgtg
gcctgtgatttctgcactgggaggaagctgagagcctgtaagtcctgtctgcagtgtgtg
gcctcttactgtgaccaacacctccagcctcattatgaattgcctgtctttaaaaagcac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacgacgaggtg
atgaagctgttctgccgcactgatcagcagagtatctgttctctctgctctgtggacgaa
cacaaaggccacgacacggtgtcagctgcagcagagaggactgagaggcagagagagctg
gaggggagtcgactcaacatccagcagaggagatgctgtattgataggatccaggatgga
gagaaggaggtgaagctgcttcagcaggaggtggaggccgtcaatggctctgctgacaaa
gcagtggaggacagtgagaagacgttcactgagctgatctgtctcgtggaggagagaagc
tctgatgtgaagcagcagctcagatcccagcaggagagagaagtgagtcgagtcagagag
ctccaggagaagctggagcaggagatctctgagctgaagaggagagacgctgagctggag
ctgctgtctcacacagaggaccacaaccagtttctgctcagctacccctcctcactgcca
gcccccctcagtgaagctacacactcctccagcaccaacatccgtcctctgagctacttt
gaggacgtgacggcggccctgtcagcagtcagagacaaactacaggacgccctgagagag
gaatggacgaacgtctcaccgactgaagtggatgttttactgtcagcagcagagcccgcc
accagagctgggttcttcagatactcacaggaagtcactctggatccaaacacagcacac
acacagctggtattatctgagggcagcagaaaagcaacactcatagaacaactacagtct
tattccaatcacccagacagattcactgaatggcctcaggtcctgagtagagagggtctg
actggacgttgttactgggaggtggagtggagagggttagcagtttatgtagcagtctca
tacaagaatatcagcagagcagggagggaaagtttatttggactcaatgacaaatcttgg
tccttagtttgtaaccaaaacagttatagatttagttacaacagtatccacactcccgtc
tcaggtcctccgtcctccagactaggagtgtacctggatcacagagctggtgttctgtcc
ttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcag
ccgctgcatgctggagtttatctttatggtgataatggagacacagctgagttttgtaaa
ctcaaatag
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