Pseudochaenichthys georgianus (South Georgia icefish): 117462408
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Entry
117462408 CDS
T09629
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117462408
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117462408
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
U-box
zf-RING_5
Gp58
Prok-RING_4
zf-RING_10
RSS_P20
zf-RING_11
Fib_alpha
DUF4715
OmpH
Motif
Other DBs
NCBI-GeneID:
117462408
NCBI-ProteinID:
XP_033960521
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All DBs
Position
17:complement(40953936..40955591)
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AA seq
551 aa
AA seq
DB search
MAQGGVQLDRETFSCSICLDLLKDPVTIPCGHSYCMDCIKRHWDGEDRKKVHSCPQCRKS
FTPRPVLLKSTMLADLVDELKKTGLQAAPADHCYAGAEDVACDVCTGRKLRACKSCLQCL
ASYCETHLQPHFDAATFKKHKLVEPSKKLQENICSRHGEVMKLFCRTDQQSICYLCSVDE
HKGHDTVSAAAERRQRELEGSRLNIQQRIQDREKEVKRLQQEVEAVNRSAGKAVEDSEKT
FTELNRLMQKRSSDVKQQVRSQQEREVSRVRELQKKLEQEISELKRRDAELQLLSHTEDH
NQFLLSYPSLPALSEARHSSSTNIRPLSYFEDVTAALSAVRDKLQDVLREEWTNVSPTEV
DVLRPAAEPTTRAGFLEYSQGITLDPNTAHTQLLLSEGSRKATYMEQQQSYSSHPDRFIV
WPQVLSRESLTGRCYWEVKWRGRRVCVAVAYKNISRAGGGKECRFGFNDKSWALECNQSS
YTFLYNSTITPVSGPQSSSVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLHVGVRF
MVMETQLSCVN
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagggaggagttcagctggaccgggaaaccttctcttgttccatctgtctggat
ctactgaaggatccggtcactattccctgtggacacagctactgcatggactgtatcaaa
cgccactgggatggagaggataggaagaaagtccacagctgccctcagtgtagaaagagc
ttcacgccgaggcctgtcctgctgaaaagcaccatgttagcagatttagtagacgagctg
aagaagacaggactccaagctgctcctgcagatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgagagcctgtaagtcctgcctgcagtgtttg
gcctcttattgtgagacacacctccagcctcactttgacgcagctacgtttaagaaacac
aagctggtggagccctccaagaagctccaggagaacatctgctctcgtcacggcgaggtg
atgaagctgttctgccgcactgatcagcagagtatctgttatctctgctctgtggacgaa
cacaaaggccacgacacggtgtcagctgcagcagagaggaggcagagagagctggagggg
agtcgactaaacatccagcagagaatccaggacagagagaaggaggtgaagcggcttcag
caggaggtggaggccgtcaatcgctctgctggtaaagcagtggaggacagtgagaagacg
ttcactgagctgaaccgtctcatgcagaagagaagctctgatgtgaagcagcaggtcaga
tcccagcaggagagagaagtgagtcgagtcagagagctccagaagaagctggagcaggag
atctctgagctgaagaggagagacgctgagctgcagctgctgtctcacacagaggaccac
aaccagtttctgctcagctacccctcactgccagccctcagtgaagctagacactcctcc
agcaccaacatccgtcctctgagctactttgaggacgtgacggcggccctgtcagcagtc
agagacaaactacaggacgtcctgagagaggaatggacaaacgtctcaccgactgaagtg
gatgttttacggccagcagcagagcccaccaccagagctgggttcttagaatattcacag
ggaatcacactggatccaaacacagcacacacacagctgttattatctgaggggagcaga
aaagcaacatacatggaacaacaacagtcttattctagtcacccagacaggttcattgta
tggcctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtgaagtgg
agagggagaagagtttgtgtagcagtcgcatacaagaatatcagcagagcaggtgggggg
aaagaatgtagatttggattcaatgacaaatcttgggcgttagagtgtaaccaaagcagt
tatacatttctttataacagtaccatcactcccgtttcaggtcctcagtcctccagcgta
ggcgtgtacttggatcacagagcaggtattctgtccttctacagcgtctctgaaaccatg
actctcctccacagagtccagaccacgttcactcagccgctacatgttggagttcgtttt
atggttatggagacacagctgagttgtgtaaactga
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