Pseudochaenichthys georgianus (South Georgia icefish): 117462681
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Entry
117462681 CDS
T09629
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117462681
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117462681
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
PRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
WDCP
TRAF3_RING
PI-PLC-Y
U-box
PWP3A-B_N
Motif
Other DBs
NCBI-GeneID:
117462681
NCBI-ProteinID:
XP_033960838
LinkDB
All DBs
Position
17:40826722..40829414
Genome browser
AA seq
549 aa
AA seq
DB search
MGGIMSQKGAQLDQDAICCSICLDVLKDPATTSCGHSFCMNCIQTHWDKEDEKEVFSCPQ
CRQSFTPRPVLLKSTMLADLVEKQKKTGLEEAPADHGYAGAEDVACDVCTGRKLRACKSC
LQCLISYCEKHLQPHYESPAFGKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLC
SVDEHKGHDTVSAAAERTERQRELEGSRLNIQQKIQVREKDVKLLQQEVEAVNGSADKAV
EDSEKMFTELNRLMEKRSSDVKRQLRSQQEREVNRVRELQEKLEQEISELKKKDAALELL
SHTEDHNQFIQSYPSSTHSSSINILPLSYLEDVKAALSKFRDKLLDVLRDKWTNVYLTVG
DVDMLLSQPQPKTRAGFLKYSRQITLDPNTASARMYLSERKRKVTSRLGESYPSHTERFI
KYHQVLSEESLPGRCYWEVEKGVGGVEVAVAYKDNDTVKEKFGDSDKSWALGFYNGRYDL
KHNNITKPVSGPKSSKVGVYLDHSAGILSFWSVSEETMTLLHRVQTTFTQPLYAGLHLSG
PIGNTAEMW
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtataatgtcgcaaaaaggagctcagctggaccaggacgcaatttgctgttcg
atatgtctggatgtacttaaggatcctgcgactacttcctgtggacacagtttctgcatg
aattgtattcaaacccactgggacaaagaggatgagaaggaagtcttcagctgccctcag
tgtaggcagagcttcacaccgaggcctgtcctgctgaaaagcaccatgttagcagattta
gtggagaaacagaagaagactggacttgaagaagctcctgctgatcacggctatgctgga
gctgaagacgtggcctgtgatgtctgcactgggaggaaactgagagcctgtaagtcctgc
ctgcagtgtttgatctcttattgtgagaaacacctccagcctcactatgagtctcctgcc
tttggaaaacacaagctggtggagccctccaagaagctccaggagaacatctgctctcgt
cacgacgaggtcatgaagatgttctgccgcactgatcagcagtgtatctgttatctctgc
tctgtggacgaacacaaaggccacgacacggtgtcagctgcagcagagaggactgagagg
cagagagagctggaggggagtcgactaaacatccagcagaaaatccaggtcagagagaag
gatgtgaagctgcttcagcaggaggtggaggccgtcaatggctctgctgacaaagcagtg
gaggacagtgagaagatgttcactgagctgaaccgtctcatggagaagagaagctctgat
gtgaagcggcagctcagatcccagcaggagagagaagtgaatcgagtcagagagctccag
gagaagctggagcaggagatctctgagctgaaaaagaaagacgccgcactggagttgctg
tctcacacagaggaccacaaccagtttattcaaagctacccctcatctacacactcatcc
agcatcaacatccttcctctgagctaccttgaagatgtgaaagctgctttgtcaaaattc
agagataaactactggacgtcctgagagataaatggacaaacgtctatctgacagtgggt
gatgtggacatgttgctgtcacaaccacagcccaagaccagagctggattcttgaaatac
tcacgtcaaatcacactggatccaaacacagcaagcgcacgtatgtacttatctgagagg
aagcgaaaagtaacttcaaggctaggagaaagttatcctagtcacaccgaaaggttcatt
aagtatcatcaggtcctgagtgaagagagtctgcctggacgctgttactgggaggtggag
aaaggtgtgggaggagttgaagtggctgtagcatacaaagacaatgacactgtaaaagaa
aaatttggagatagtgacaagtcttgggcattaggtttttacaatggtcgttatgattta
aaacataacaatatcacaaaacctgtctcaggtcctaagtcctccaaagtcggggtttac
ctggatcacagtgcaggtattctgtctttctggagcgtctcagaggaaaccatgaccctc
ctgcacagagtacagaccaccttcactcagcctctttatgcaggacttcatcttagtggt
cccattggaaacactgctgagatgtggtga
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