KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117462681
Entry
117462681         CDS       T09629                                 
Name
(RefSeq) tripartite motif-containing protein 16-like
  KO
K12006  tripartite motif-containing protein 16
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pgeo04121]
    117462681
Ubiquitin system [BR:pgeo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    117462681
Motif
Pfam: zf-C3HC4_4 zf-RING_UBOX PRY zf-B_box zf-C3HC4 zf-C3HC4_2 SPRY zf-C3HC4_3 zf-RING_2 zf-RING_5 zf-RING_6 WDCP TRAF3_RING PI-PLC-Y U-box PWP3A-B_N
Other DBs
NCBI-GeneID: 117462681
NCBI-ProteinID: XP_033960838
LinkDB
Position
17:40826722..40829414
AA seq 549 aa
MGGIMSQKGAQLDQDAICCSICLDVLKDPATTSCGHSFCMNCIQTHWDKEDEKEVFSCPQ
CRQSFTPRPVLLKSTMLADLVEKQKKTGLEEAPADHGYAGAEDVACDVCTGRKLRACKSC
LQCLISYCEKHLQPHYESPAFGKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLC
SVDEHKGHDTVSAAAERTERQRELEGSRLNIQQKIQVREKDVKLLQQEVEAVNGSADKAV
EDSEKMFTELNRLMEKRSSDVKRQLRSQQEREVNRVRELQEKLEQEISELKKKDAALELL
SHTEDHNQFIQSYPSSTHSSSINILPLSYLEDVKAALSKFRDKLLDVLRDKWTNVYLTVG
DVDMLLSQPQPKTRAGFLKYSRQITLDPNTASARMYLSERKRKVTSRLGESYPSHTERFI
KYHQVLSEESLPGRCYWEVEKGVGGVEVAVAYKDNDTVKEKFGDSDKSWALGFYNGRYDL
KHNNITKPVSGPKSSKVGVYLDHSAGILSFWSVSEETMTLLHRVQTTFTQPLYAGLHLSG
PIGNTAEMW
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgggaggtataatgtcgcaaaaaggagctcagctggaccaggacgcaatttgctgttcg
atatgtctggatgtacttaaggatcctgcgactacttcctgtggacacagtttctgcatg
aattgtattcaaacccactgggacaaagaggatgagaaggaagtcttcagctgccctcag
tgtaggcagagcttcacaccgaggcctgtcctgctgaaaagcaccatgttagcagattta
gtggagaaacagaagaagactggacttgaagaagctcctgctgatcacggctatgctgga
gctgaagacgtggcctgtgatgtctgcactgggaggaaactgagagcctgtaagtcctgc
ctgcagtgtttgatctcttattgtgagaaacacctccagcctcactatgagtctcctgcc
tttggaaaacacaagctggtggagccctccaagaagctccaggagaacatctgctctcgt
cacgacgaggtcatgaagatgttctgccgcactgatcagcagtgtatctgttatctctgc
tctgtggacgaacacaaaggccacgacacggtgtcagctgcagcagagaggactgagagg
cagagagagctggaggggagtcgactaaacatccagcagaaaatccaggtcagagagaag
gatgtgaagctgcttcagcaggaggtggaggccgtcaatggctctgctgacaaagcagtg
gaggacagtgagaagatgttcactgagctgaaccgtctcatggagaagagaagctctgat
gtgaagcggcagctcagatcccagcaggagagagaagtgaatcgagtcagagagctccag
gagaagctggagcaggagatctctgagctgaaaaagaaagacgccgcactggagttgctg
tctcacacagaggaccacaaccagtttattcaaagctacccctcatctacacactcatcc
agcatcaacatccttcctctgagctaccttgaagatgtgaaagctgctttgtcaaaattc
agagataaactactggacgtcctgagagataaatggacaaacgtctatctgacagtgggt
gatgtggacatgttgctgtcacaaccacagcccaagaccagagctggattcttgaaatac
tcacgtcaaatcacactggatccaaacacagcaagcgcacgtatgtacttatctgagagg
aagcgaaaagtaacttcaaggctaggagaaagttatcctagtcacaccgaaaggttcatt
aagtatcatcaggtcctgagtgaagagagtctgcctggacgctgttactgggaggtggag
aaaggtgtgggaggagttgaagtggctgtagcatacaaagacaatgacactgtaaaagaa
aaatttggagatagtgacaagtcttgggcattaggtttttacaatggtcgttatgattta
aaacataacaatatcacaaaacctgtctcaggtcctaagtcctccaaagtcggggtttac
ctggatcacagtgcaggtattctgtctttctggagcgtctcagaggaaaccatgaccctc
ctgcacagagtacagaccaccttcactcagcctctttatgcaggacttcatcttagtggt
cccattggaaacactgctgagatgtggtga

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