Pseudochaenichthys georgianus (South Georgia icefish): 117462832
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Entry
117462832 CDS
T09629
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117462832
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117462832
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
PRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
zf-ANAPC11
TRAF3_RING
WDCP
PilZN
U-box
Motif
Other DBs
NCBI-GeneID:
117462832
NCBI-ProteinID:
XP_033961066
LinkDB
All DBs
Position
17:40792847..40794738
Genome browser
AA seq
543 aa
AA seq
DB search
MGGIMSQKGAQLDQDAICCSICLDVLKDPATTSCGHSFCMNCIQTHWDKEDEKEVFSCPQ
CRQSFTPRPVLLKSTMLADLVEKQKKTGLEEAPADHGYAGAEDVACDVCTGRKLRACKSC
LQCLISYCEKHLQPHYESPAFGKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQFICYLC
SVDEHKGHDTVSAAAERTERQRELEGSRLNIQQKIQVREKDVKLLQQEVEAVNGSADKAV
EDSEKMFTELNRLMQKRSSDVKRQLRSQQEREVSRVRELQEKLEQEISELKRRDAALELL
SHTEDHNQFIQSYPSSTHSSIILPLPYLEDVKAALSKFRDKLLDVLRDKWTNVYLTVGDV
DTLLSQPQPKTRAGFLKYSRQITLDPNTASARMYLSERKRKVTSRLGESYPSHTERFIKY
HQVLSEESLPGRCYWEVEKGVGGVEVAVAYKDNDTVKEKFGDSDKSWALGFYNGRYDFKH
QKNPTPVAGPQSSRVGVYLDHRAGILSFWSISEETMTLLHRVQTTFTQPLYAGLPPGNTA
EML
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtataatgtcgcaaaaaggagctcagctggaccaggacgcaatttgctgttcg
atatgtctggatgtacttaaggatcctgcgactacttcctgtggacacagtttctgcatg
aattgtattcaaacccactgggacaaagaggatgagaaggaagtcttcagctgccctcag
tgtaggcagagcttcacaccgaggcctgtcctgctgaaaagcaccatgttagcagattta
gtggagaaacagaagaagactggacttgaagaagctcctgctgatcacggctatgctgga
gctgaagacgtggcctgtgatgtctgcactgggaggaaactgagagcctgtaagtcctgc
ctgcagtgtttgatctcttactgtgagaaacacctccagcctcactatgagtctcctgcc
tttggaaaacacaagctggtggagccctccaagaagctccaggagaacatctgctctcgt
cacgacgaggtcatgaagatgttctgccgcactgatcagcagtttatctgttatctctgc
tctgtggacgaacacaaaggccacgacacggtgtcagctgcagcagagaggactgagagg
cagagagagctggaggggagtcgactaaacatccagcagaaaatccaggtcagagagaag
gatgtgaagctgcttcagcaggaggtggaggccgtcaatggctctgctgacaaagcagtg
gaggacagtgagaagatgttcactgagctgaaccgtctcatgcagaagagaagctctgat
gtgaagcggcagctcagatcccagcaggagagagaagtgagtcgagtcagagagctccag
gagaagctggagcaggagatctctgagctgaagaggagagacgccgcactggagttgctg
tctcacacagaggaccacaaccagtttattcaaagctacccctcatctacacactcatcc
atcatccttcctctgccataccttgaagatgtgaaagctgctttgtcaaaattcagagat
aaactactggacgtcctgagagataaatggacaaacgtgtatctgacagtgggtgatgtg
gacacgttgctgtcacaaccacagcccaagaccagagctggattcttgaaatactcacgt
caaatcacactggatccaaacacagcaagcgcacgtatgtacttatctgaaaggaagcga
aaagtaacttcaaggctaggagaaagttatcctagtcacacagaaaggttcattaagtat
catcaggtcctgagtgaagagagtctgcctggacgctgttactgggaggtggagaaaggt
gtgggaggagttgaagtggctgtagcatacaaagacaatgacactgtaaaagaaaaattt
ggagatagtgacaagtcttgggcattaggtttttacaatggtcgttatgatttcaaacat
cagaaaaacccaactcctgtcgcaggtcctcagtcctccagggtcggggtttacctggat
cacagagcaggtattctgtctttctggagcatctcagaggaaaccatgaccctcctgcac
agagtacagaccaccttcactcagcctctctacgcaggacttccccctggaaacactgct
gagatgttgtga
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