Pseudochaenichthys georgianus (South Georgia icefish): 117464313
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Entry
117464313 CDS
T09629
Symbol
wdr90
Name
(RefSeq) WD repeat-containing protein 90
KO
K24759
WD repeat-containing protein 90
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117464313 (wdr90)
Cilium and associated proteins [BR:
pgeo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117464313 (wdr90)
BRITE hierarchy
Motif
Pfam:
WD40
CFA20_dom
ANAPC4_WD40
Nup160
HELP
SGL
WDR54
Motif
Other DBs
NCBI-GeneID:
117464313
NCBI-ProteinID:
XP_033962574
LinkDB
All DBs
Position
19:22180529..22212456
Genome browser
AA seq
1848 aa
AA seq
DB search
MASKGWQHPYVNIFKHVRVEDWKRSDKVGEVSTCTDKRLKCSVFRIRGPVPANSFIKIPK
NINQSLGLTGRFFYLLFRPTPGKYFVVHLDVSVEEGQVVRISFSNMFKEFKSTATWLQFP
FLCGAAKDSVYESTAKSARHGLVGPAPTSVRWTCVTLDLQYTLSVYLNRCYSQLKSIKLC
ANMAVKNMFTSNLLLDPGLSFSEAKLMGLVSSEGTSPVPRDMSFPVPKGGSWHDLYDHIR
FPSEGTKLPFDSIQKDPLRPEASCVSDQRRPIREEPCFVSLSKPLQDRVPLTQQITAPKS
IARNQPPMVVTEIPELGLVSTHHSDDSLGQNTDQHQQETTSSEQFTSRPFWDTDDGGVHV
HLHPEDGFSQHGEESELEVACTPVPRPVHPSSSNKSRQQKLLPDPILRLNRIIGFGGATT
KYALWSKSGDEVVYPCHAIIVSMKISPNQQRFFIGHTDKVSALAFNGNTTLLASAQTGNH
SVVRVWDYHKGKCLAMSRIHAHSLSSLSFSYSGGILCGVGKDSHNKTMVVVWNTMNVSEG
GEVSIIAKAHTDVDIHTMKVAFFDDTRMVSCGRDNIRLWRVRNGTLRSCPVNLGDYHSLD
FTDVAFEEGNSFHQHLDDRTLFASSRSGYIFEIDYSRMVVRNVRRLLPAQQQHADHREKQ
TFNSGPGIAINSISVSSSFCATGSEDGFLRLWPLDFSAVFLEAEHEGPVSLVSVSSDSLR
VLAATSTGNLGFLDVSSRGYNTVMRSHTDTVLGFSVDGIRRHLTSASSDGTVRVWNMDSL
HQLYDFASEDSPCSVAFHPSEQVFSCGFSSGIVRVFDISAAKLLAEHKQHRGEVVGLAFS
PDGEFMYSADSQGSLALYNASEEDLNVIRVVCNVVARGTEHAPDALAVSSDSCCLAFIGP
SEYIVTIADSRSLDELLHVDVEYFGTCRAPRLDSARRICFMLICTVLFLLPTQSCYSFSN
QCLLVTVFLSRQVSKVHKHQCSSLAVSEDSRFLLTAGHNAVKVWDYNMQLHINSQMFIGH
SQPIRQVGFTPDQLGVVSVGDAIFLWDFLALAVDSLTDSRSPLVIRHTPAPKSVQPHTEV
NGVRLSNGMPRRTAPLPSSPPPRLDISTLDQVDQGVLGSLSICDDPPTVPPASVADPSSD
PRPPSSFLRVTELTHTSPLNSSLTDAVELKGKKPVRPDCYRHFIPRFKTSTLDQAAVAPQ
AGEEGIKLKAVIGYNGNGRSNMVWSPDRGLFAYSCGCVVVVEYLHTGSQRHLQGHSEEIS
CLAVTHDAQTVASAAGGSNASRSLICIWDVQNGTCRSTISYHRGAVQSLAFSRDDRFFLS
VGDFSEPEVALWSSKTFQLLSSVSMSGPLHDAAFNPSAAGQLACVGRQGVFFCLIHTQGS
DVDLKVQRVKAPSEVGEVELTALCYHTDSFLFTATNRGHVCVWDVNTQRCFMTWEADEGE
IGVLLCRGTHLLTGSNTRWLRLWEVEAVRGMKPQEKVCSGEDSGTSVVLEQEIMLDGTTV
SAAFDTSMDMGIIGTTAGTLWYINWSDCSSIRLVSGHKTQVNDVVFSSDERHFATCSEDG
SVRVWSAPSNELVVQFQVLNQACGCVCWSPSSSTESACVAGGYSDGTLRIFRLSSSEMEM
KLHPHQVAVTAIQYSADGHVILSAGKNGLVAVSSPMNGATIRIIRDHKGALITTIQCVNE
QCKNLKLEGKEMWLAASADRRVSVWAADWLNDKCDLLDWLTFPAPAYIGDDNPPPSLAAF
CPADPGLVVYTGYGVEKELSFYSLAKKQIIKTIALPDWATCLSLSCHSQLIAVGSKGRVL
KLIKSSSGRFQDFLQHSDSLQTCRFSPSGKLLFTVAYNEILLWEVQDL
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaaggttggcagcatccttacgtcaacatattcaaacatgtcagggttgaa
gactggaaacggtcggacaaagtgggggaagtgtcaacatgcacggacaagcgcctgaag
tgctcagtgttcaggatcagagggcctgttcctgccaacagcttcatcaagatacccaaa
aacatcaaccagtctctggggctgaccggtcgcttcttctaccttctcttcaggcccacc
cccggaaaatactttgtggtccacctggatgtttctgtcgaggagggccaggtggtccgt
atctctttttccaacatgttcaaagaatttaaatccacggctacctggcttcagtttcct
ttcttgtgcggagctgcaaaggattcagtctatgaaagcacagctaaatctgcaagacat
ggcttagtgggtcctgctcccacgtcagtgcgttggacctgtgtgacgctggatctgcag
tacactctctctgtctacctcaaccgctgctacagtcaactcaagagcattaagctttgt
gccaacatggcagtgaaaaacatgttcaccagcaacctgctgctagatccaggtctttcc
ttcagtgaagccaagctgatgggtctggtttcttccgagggaacgagtcccgtccccaga
gacatgtcatttcctgttcccaaaggaggctcctggcacgacctctacgatcacatcagg
tttccctcagagggaacgaagctaccctttgactccattcaaaaagaccctctcaggccc
gaggctagttgtgtctctgaccaaagaagaccaattagagaggagccttgctttgtcagc
ctcagcaaaccacttcaggaccgagtgcctctcacccagcagatcaccgctccaaaatca
atcgcaaggaatcaacctcccatggtggtgactgaaatcccagagctaggtctagtttct
actcaccacagtgatgattccctcggccaaaatactgaccagcatcagcaggagacaact
agttcagagcagttcacatccaggcccttctgggacaccgatgacgggggcgttcatgtt
caccttcatcctgaggatggcttcagccaacacggggaggaaagtgaactagaggttgct
tgcactccagttccacgcccggtgcatccatcatcatccaacaaaagcagacagcagaag
ctgctcccagaccccattctcaggctcaatcgaatcatcggcttcggaggagccactact
aaatatgccctgtggagcaaatcgggtgatgaagttgtgtatccgtgtcacgcaatcatc
gtctccatgaagatatcgcctaaccagcagagattcttcatcggacacactgataaggtc
tctgctctggcttttaatggcaacacaacactgctggcctcagcacaaaccggcaaccac
agtgtagtcagagtgtgggattaccataagggaaagtgcctggccatgtccaggattcat
gctcattcattgtcctctctgagcttctcatacagcggtggtattctctgtggagtgggt
aaagacagccacaataaaactatggtggttgtctggaacactatgaacgttagtgaaggt
ggagaagtgagcattatagccaaagctcacacagatgtggacatacacaccatgaaggtg
gccttctttgatgatacaaggatggtgtcatgtggtcgggataatatccgcctgtggaga
gtgaggaatggaacgctgcgctcttgtcccgtcaacctgggtgactaccactcactggac
ttcaccgatgtggcctttgaggagggaaactctttccaccagcatcttgatgatcgaaca
ctatttgccagcagtcggagtggctacatctttgagatcgactacagcagaatggttgtt
agaaacgtcaggcggctgttacctgctcagcagcagcatgcagaccacagggagaaacag
acttttaactcaggtccaggcattgccatcaacagcatcagtgtgtcctcatcattttgc
gccacaggttctgaggatggcttcctgagactctggcccctggatttttccgctgtcttc
ctggaggctgagcatgaaggacctgtgagcctggtgtcagtctcttctgacagccttcgg
gtgctggcagccacctccactggtaacctgggtttcctcgatgtgagcagccgcggttac
aacacggtgatgaggtcacacactgacacggtgctcggcttcagcgtggatggcatccgc
cggcatctaacctcagcctcctccgacggcaccgtgcgcgtttggaacatggattccttg
catcagttgtatgattttgcgtcagaggacagcccctgctcggtggctttccatcccagc
gagcaggtcttctcttgtggcttcagctccggcatcgtcagagtcttcgacatctccgct
gccaagctgctggctgaacacaagcagcacagaggtgaagtggtgggtctggccttctca
ccggacggggagttcatgtacagcgctgactctcagggctctctggcactttacaatgcc
tcagaggaagacctcaacgtgatcagagttgtgtgtaatgtggtggctcgaggcactgag
cacgctccagacgctctcgctgtgagcagcgacagctgctgtctggctttcatcggcccc
tcggagtacatcgtcaccatcgctgactcgcgctctctggatgagttgctccatgtagat
gtggaatattttgggacgtgcagagccccccgtctggattctgctcggaggatatgcttc
atgttaatatgtacagttctgttcctacttcctacgcaatcatgttattctttttccaac
caatgtttgttggtgactgtctttctgtcccgacaggtgtccaaggtgcacaaacaccag
tgctcgtccctggctgtgagtgaggacagtcggttcctgctgacggcgggacacaatgct
gtcaaagtgtgggattacaacatgcagctccatataaactcacagatgtttatcggccac
agtcagccaatccgccaggtgggcttcacccccgaccaactgggcgtggtctcagtggga
gacgccatcttcctttgggacttcctggcacttgctgtcgactctttgactgacagccgt
tcacctctggtaataagacacacccctgcccctaaatcagttcaaccacacactgaagtg
aatggagttcggttgtccaatgggatgcctcgacgcacggctcctcttccctcctctccg
ccaccacgactcgacatcagcaccctcgaccaagttgaccagggggttttgggctccttg
tcgatatgtgatgaccccccaacagtcccccccgcttcagttgcagacccttcctctgac
cccagacctccatcctccttcctcagagtcacagaactgacccacacatctccactcaac
tcaagtcttacggacgctgttgagttgaaaggaaagaagccagtacgtcctgattgttac
aggcactttattccacgcttcaagacctccactctggatcaggctgcagtggctcctcag
gcaggagaagagggcataaagctgaaagcagtcatcggctacaatggaaacggccgtagc
aacatggtgtggagccctgaccgaggtttgtttgcgtactcgtgtggctgtgtggtggtg
gtggagtatcttcacacaggaagtcagagacacctgcagggccacagcgaggagatctct
tgtctcgcagtcacacatgatgcacagacggtggcatcagcagctggaggcagtaacgcc
agcaggagcctcatctgcatttgggacgtccagaatggaacctgtcggagtaccatctcc
taccacaggggggcagtgcagagtctggccttctcaagggacgatcgcttctttctctct
gttggagacttctctgagccagaggtggctctgtggagcagtaagaccttccagctgctg
tccagtgtgagtatgtcggggccgctccatgacgcagcgttcaacccctccgcagccggc
cagctggcctgcgtgggccgccagggggttttcttctgcctgatccacacacagggttca
gatgtagacctcaaggtgcagagggtgaaagccccctcagaggtgggcgaggtggagctg
acggcgctgtgctaccacaccgactcctttctgttcaccgccaccaatcgaggacacgtt
tgcgtctgggacgtaaacacacagcgctgcttcatgacctgggaggctgatgagggagag
attggagtgctgctgtgtcgggggacccatctgttgacgggcagcaacacccgctggttg
cgtctgtgggaggtagaagctgttcggggcatgaagcctcaggaaaaggtctgcagcggg
gaagacagtggcacctcagtggtgttggagcaggagataatgctggacgggacgacggtc
agcgctgcgtttgatacctcgatggacatgggcatcattggcaccacagcaggaaccctc
tggtacatcaactggtcggactgcagcagcatccggctggtcagcgggcacaagacccag
gtgaatgatgtggtgttcagctctgacgagagacattttgccacctgcagcgaggacggc
agtgtgagggtgtggtcggcgcctagcaacgagctggtggtgcagttccaggtgctcaac
caggcctgcggctgtgtgtgctggagcccttcttccagcacagagagtgcatgtgtggct
ggaggatacagcgatgggactctgaggatcttcaggctttcctcctcagagatggagatg
aagctgcatcctcatcaagtggccgtcactgccatccagtactcagctgacggtcatgtg
atcctttcagcggggaagaatggtctggtggctgtcagcagcccgatgaatggagcaact
attcgtataatccgggatcacaaaggagccctgattaccaccatccagtgtgtgaatgaa
cagtgtaagaatctcaaactcgaaggaaaggagatgtggttggctgccagtgctgacaga
cgcgtcagtgtgtgggctgctgattggctgaacgacaaatgtgatctacttgactggctg
acatttcctgctcccgcctatatcggggatgacaacccacctcccagcctggctgccttc
tgccccgcagaccccggcctggtggtctacaccggctatggagtggagaaagagctgtcg
ttctacagcctggcaaagaaacagataatcaaaacgattgcccttcctgactgggccaca
tgcttaagcctctcctgtcacagccaactcatagctgtgggatcaaaagggcgggtgttg
aagctgatcaagtcgtccagcggcaggttccaggacttcctgcagcacagcgactcgctg
cagacgtgtcgcttctcgccttcaggaaaacttctcttcactgtagcttataatgagatc
ctgctgtgggaggtgcaggacctctga
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