Pseudochaenichthys georgianus (South Georgia icefish): 117464325
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Entry
117464325 CDS
T09629
Symbol
trim16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117464325 (trim16)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117464325 (trim16)
BRITE hierarchy
Motif
Pfam:
SPRY
PRY
zf-B_box
DUF4407
BshC
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
117464325
NCBI-ProteinID:
XP_033962583
EnsemblRapid:
ENSPGEG00000021387
LinkDB
All DBs
Position
19:complement(7017067..7026057)
Genome browser
AA seq
635 aa
AA seq
DB search
MADTAAVAAPVSQQQCAVCSGALSGEKTAACPHAVCGSCLGDKNKGCPKCLQSSAQPKPE
PKQNGTEADTPEIKSKEEQDPKTTGEIKIQEDLKESEDPHKPEEEKKEGPPQTHGEKEQV
KEEEEVKEEPLGPDDVVCDSCIESPCRALKSCLTCLVSYCEAHLRPHLENPKFQNHRLVE
PLRDIERRTCESHKWPLELFCCADSCCVCQDCVTEEHKGHNTIPVVEARSRIEKELRDKQ
MEMVKTVTAAENAINKLQLNTVTIESSVTEVKAVIETQFEELKAVMERAKREVTEILEAD
EKQALRQADGIQVHLEQRCTELKKTQAQVEKLSKNKNDVDFLQEYSEWKKEATDNSLPGV
SIGLMDRLTSFSSVIVESTRELCAMLVSSYVEKVKETCKNDKMGIKTTVHEIVAAKQNMT
IPDPVTHTDFLKYSTNVSFDAETAHKFLRLTEENRKVTNTTPWQHPYPDVPERFENCRQV
LATESFYLGRHYFEVDIGGEGTHLGLTYKSIDRKGNESNSCITGNNFSWCLQWNGRTFSA
WHSDVETPLSVEKFTRIGVYVDYSRGLLAFYGVDDAMTLIHKYKAEFLQPIYPAFWLSKK
ENIVALVAPGELLRLKSPSPPTSPANGAIVPKTAA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacagcagctgtagcagctccagtctcccagcagcagtgtgctgtctgctca
ggtgcactgagtggggagaagacagcagcctgccctcacgctgtttgtggctcctgcttg
ggggacaaaaacaaaggatgtcccaagtgtctgcagagctcagcccagcctaaacctgaa
cccaaacagaacggaacagaggctgacactccggagatcaagagcaaagaggagcaggac
cctaaaacaacgggggagatcaaaatccaagaagacctgaaggagtctgaagaccctcac
aagcctgaggaggagaagaaagaggggccaccacagacacatggagagaaagaacaggtg
aaagaagaagaggaggtgaaggaggaacctctgggccccgacgatgtggtgtgtgactcc
tgtatcgagagcccctgcagggccctcaagtcctgcctcacctgcctggtgtcctactgc
gaggcccacctccggcctcacctggagaaccccaagtttcagaaccaccggctggtggag
ccgctcagggacatcgagaggcggacctgcgagagccacaagtggcccctggagctgttc
tgctgcgccgactcctgctgcgtgtgtcaggactgtgtgacggaggagcacaagggccac
aacaccatccctgtggtggaggctcgcagtcggatagagaaggaactgagggacaagcag
atggagatggtgaagaccgtgaccgcagcagagaacgccatcaacaaactccaactcaac
acagtgactatcgagagttcagtgacagaggtgaaggcggtgattgagacccagttcgag
gagctgaaggccgtgatggagagggcgaagcgggaggtgacggagatcctggaggccgac
gagaagcaggcactgaggcaggccgacggcatccaggtccacctggagcagaggtgcacg
gagctgaagaagacgcaggcgcaggtggagaagctctccaagaacaaaaatgatgtggac
ttcttacaggagtattcggagtggaagaaagaggccactgataactctctgcctggggtc
tccatcggcctgatggaccgtctgacctccttcagcagcgtcatcgttgagtccacgcgc
gagctgtgtgccatgctggtgtcttcatacgtagagaaagtgaaagagacctgcaagaac
gacaaaatgggaatcaagacaacagttcatgaaattgttgcagcaaaacagaacatgact
ataccggatcccgtgacacacaccgacttcctcaagtattccaccaacgtgagctttgac
gcggagaccgcccacaagttcctgcggctgacggaagaaaacaggaaagtgacgaacacc
acaccctggcagcacccttaccctgacgtacctgagaggttcgagaactgccgccaagtt
ctggcgacggagagcttctatctgggccgccactactttgaggtggacatcggcggcgag
ggcacgcacttgggtttgacctacaagagcatcgaccgcaagggcaacgagagcaacagc
tgcatcacgggaaacaacttctcctggtgtctacagtggaacggacgcaccttctccgcc
tggcacagcgacgtggaaacccctctcagtgtggagaagtttactcgtatcggggtttac
gtggactactcaagaggcctcctggctttctacggtgtggatgacgccatgacgctcata
cataagtacaaggcagagttccttcagcctatttacccggctttctggttgtccaagaag
gagaacatcgtcgccttggtggcaccaggggagctattacgactcaaaagcccctctcct
ccaacctcacctgcaaacggagcaattgttccaaaaacagcggcataa
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