Pseudochaenichthys georgianus (South Georgia icefish): 117467388
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Entry
117467388 CDS
T09629
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117467388 (msh4)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Meiosis-specific proteins
Others
117467388 (msh4)
BRITE hierarchy
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
AAA_23
ATPase_2
Motif
Other DBs
NCBI-GeneID:
117467388
NCBI-ProteinID:
XP_033966873
EnsemblRapid:
ENSPGEG00000021725
LinkDB
All DBs
Position
22:16011913..16019521
Genome browser
AA seq
922 aa
AA seq
DB search
MFSSSTDEVGDTPECRETWGVSPMDRSEPNETTSYCPPSTSSSSSHQSLGEGSSSSGHGL
SLPRMASGQLHHSYTLDRTSSSLLATTSDSSSLRSRGVTPKLRRTPGSAGAPGTHPARTP
LTDHTVTSCSSATSTCGASVIVAVVEGRGLARGEIGIASLNLKCPELILSQFADTGAYAK
VITKMHILVPLEILMPDTASEKGKGTKLFNLITENFPGVAFTAIQRKYFNERKGLEYIQQ
LCAPEFGTVIMEVQTKYYCLAAAAALLKYLEFIQNSVYAAKSLKVTFKGSEQTAMIDSAS
ATNLELVVNNRDHRSEHTLLGVLNHTKTPGGARRLRSNILEPLVDVDTINIRLDTIQELL
QDEELFFGLKNAIGHFLDIDQLLSVLVQIPKQETIQVAEAKITHVIQLKHTLDLVPRLRL
VLKNCKTALLKAYSTSLEDNRFDMILAQIKTVINEDTTYLKGSLNMRTQKCYAVRPNINE
FLDIARRAYTEIVDDIAGLVNQTGEKYGLPMRTSFSTARGFFIQMKLEGVVLPQGKLPPE
FIKVTKHKNNYGFTIADLMKMNDRCDEALREIFHMSYVVTCQLLSTVHEHIHCLYKLSDA
VSMLDMLLSLANACTISDYVRPEFTDTLAIKQGRHPILERIVGQQPISNNSYISEGSNFV
IITGPNMSGKSTYLKQVALCQIMAQIGSFVPAEYASFRVADQVFTRIGVDDDFETNSSTF
MLEMKEIAYIIHNVSDRSLIIIDELGRGTSAEEGIGICHTVCEFLLSLKAFTLFATHYLE
LCHLESLYPNVENQHMEVQHTRSGDTGAESVVYTYLLNRGCSEERHYGLRAAEMTALPSN
IIQEAKIIASKVSQQLLAKHHSDPETQRQRAVYHLATRLMQTARNSRLDPESLRMYLKGL
KKQYEAEVQAAGPSESMDTEEE
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgttttctagcagcacagacgaggtaggtgacaccccagaatgtagagaaacatggggg
gtgtccccaatggacagaagcgagccgaatgaaacgacctcatactgtcccccttcaact
tcgtccagttcatcccaccagagtttaggtgaaggcagctcgagctccggccatggtcta
tcgctccctcggatggcctcaggtcagctccatcacagctacacgttagacaggaccagt
tcatcacttcttgcgactacctcggacagctcctcccttcgcagccgtggagtaacaccg
aaactcaggaggaccccggggtctgctggggcccctggcacacacccagcacggacacca
ctgactgatcacactgtaacaagctgttcctctgcaacgtcaacttgtggtgcctctgtg
attgttgcggtggttgaaggccgcggtttggccaggggagagattggcattgctagtctc
aacttgaaatgcccagagcttatactctcccagtttgcagacactggggcgtatgccaag
gtcattaccaaaatgcacatattggtgccactggaaatactgatgccagacacagccagt
gagaagggaaaagggaccaagctgttcaacctcatcaccgagaacttcccgggtgtagct
ttcactgctatccaaaggaagtactttaatgagaggaaaggactggagtacattcagcag
ctgtgtgctccagaatttggcaccgtcatcatggaagtgcaaactaagtattattgccta
gctgcagcagctgctttgttgaaatatttggagttcatccagaactctgtctacgctgcc
aagtctctcaaagtgacttttaaaggaagcgagcagacagcaatgattgactcagcatct
gccactaacttggagttggtggtcaataacagagaccacaggagcgagcatactctttta
ggtgtacttaaccacactaaaacgcctggtggagctagaaggttgcgctccaatattctg
gagcctctagttgatgtggacaccatcaacatacgcttggatactatacaagagctgctg
caggacgaggagctcttctttggcctgaagaatgccataggtcacttccttgacattgac
cagctgctttctgttctcgtccaaatcccaaagcaggaaacgattcaggttgctgaagca
aagattactcacgtcattcagctgaaacacacgttagacctagtgccacggttacggttg
gtgttaaagaattgcaaaacagctctgctcaaggcatacagcacctccctggaagacaac
aggtttgacatgatcctagcacagatcaagacagtgataaatgaggatactacctacctg
aagggcagcctgaacatgcgcacccagaagtgttatgctgtccgccccaacatcaacgag
ttcctcgacatcgcacgcagagcttacactgagatagtggacgacattgcaggcctggtg
aaccagacgggggagaaatacggtttgccgatgcgtaccagcttcagcacagctcgaggt
ttcttcatccagatgaagcttgaaggggtggtgttgcctcaagggaaactcccccctgag
ttcatcaaggtcaccaagcacaagaacaactatggcttcactattgctgacctgatgaag
atgaatgaccgctgtgatgaggccctgagggagatcttccatatgtcctatgtggttaca
tgtcagctgctaagcactgtccacgagcacatccactgcctttacaagctctctgatgct
gtctccatgctggacatgttgctgtcactggccaacgcatgcaccatctcagactatgtg
cgcccagagttcacagacacgctggccatcaagcagggtcgtcaccccattctggagcgg
attgttggacagcagcccatatcgaacaatagctacatctccgagggcagcaactttgtc
atcatcactggacccaacatgagcggcaaatccacctacctcaagcaggtggcgctgtgt
cagatcatggctcagataggttcctttgtccctgctgagtatgcatcttttcgtgttgct
gatcaggttttcaccaggataggtgtggatgatgattttgaaacaaactcttccaccttc
atgttggaaatgaaggagatcgcttacataatccacaatgtaagtgacaggtccctgatc
atcatagatgagttggggcgtggaaccagtgctgaggaaggcatcggcatctgccacaca
gtttgcgagttcctgcttagcctcaaggcattcactctgtttgcaacacattatctggag
ctctgccatctggagtctctttatcccaacgtggagaaccagcacatggaggttcagcac
acacgcagtggggacaccggggcagagagcgtggtgtacacatacctgctaaatcgaggg
tgctctgaagaaagacactatggtctgagagcagcagaaatgactgcacttccttcaaac
ataattcaagaggcaaagataattgcctccaaagttagccagcagcttctggccaaacat
cacagtgatccggaaacacagaggcagagagctgtgtatcacctggccacccgcctcatg
cagactgccaggaactccagacttgaccctgaaagcttgagaatgtatctgaagggcctg
aagaagcaatatgaggcagaggtacaggccgcagggccctcagagtccatggacacagag
gaggaatga
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