Pteropus giganteus (Indian flying fox): 120584528
Help
Entry
120584528 CDS
T07511
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pgig
Pteropus giganteus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120584528 (TNRC6A)
03036 Chromosome and associated proteins [BR:
pgig03036
]
120584528 (TNRC6A)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120584528 (TNRC6A)
Chromosome and associated proteins [BR:
pgig03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120584528 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120584528
NCBI-ProteinID:
XP_039696123
LinkDB
All DBs
Position
Unknown
AA seq
1898 aa
AA seq
DB search
MEKKRKEEDRRKKGAAPKKATEQKLKVSEQAKRGVSQPQPAGAPSGTSSAPSPRGHASRA
PADSEQPQQPPRQEPRQEPQPPQQPPQALSRLPREVPPRFRHQEHRQLLKRGPHFPVIAA
TLGSAARALSGQADPQPPSDGAVRGSRARPDVNHNNSGSHYENSQWGPASSPSDSSTNCK
NAVVNDAPGEAAWPSVPGADPEPASECVGADSASGSESERHPATMASGRAGERDGLRDSP
GLGPQNKFVVAGGGSTAPWGFSHGAVISTCQVPADAPASRSESGSKAVTAWGAGSPSSNG
GPGPSTLHPASNHGAWPALESNGLAPRGPGAGGAGGGGQCSPAGQAPGSQSVSSKAGASS
TPGAWGSLQETCDSEVSGTQKASFSGQPQTIATETAGPNNTTHFATSSLPSSGPAQSGEP
PSSAGARRAGTGPHPQTPAPPVLHGPSLPQLSNGEPQGGGSHGTTWGAYGASYSGDTRAS
PNGQANGDTVNATLMPPGTNGPVGANFQGNTSKRGGAWEPGAAHSQSASWASGNGPGSGG
GRRGWAAPVQGTGADPAGVEWGQLPGTQHSSDSTSSGAQRFTNGWKSAEEEGQGSAPPQP
SEQSGVWAKAGGAGDSDGSAESTGRPEDRAPGDGQSRERRKVDPHTLLQSIVNRADLDPR
VLSNSGWGQTPIKQNTAWDTEMSPRGGRKADRGTEAWGGSAAQTFNSGPCADKTSPGGHD
SASGSGWGEPRPPLRWGDAKGSDCQGGWEDDSVATGTVRSGQWGPRKEETSAWGDLQKSK
QGWGDGQKSQQGWPAPAGDDWGETARSDHWGEANKTSSSGGSDSDRSVSGWNELGRASSF
TWGNNLNPNNSSGWGESSKPSAPQGWTDPAKAGQTLGWGEAKPASSPDWNKQQDGVGSWG
ATPAPGKPPGTGWRGGPMPVSAGPEPTGWEEPSPESIRRKMGIDDGTSAWGDPSTYNCRG
VSMWGRSAPGGRPDQQAQGHQLLPPTSAVSNQEAGGSGWGEPWAEPPTPATTVDNGTSAW
GRPVDSGPSWGDPVAAASSTPAWGSSSAAPQGLGKPGPKSMQDGWCGDDMPLPASRPPGW
EEEEDVEIGMWTGNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERRRPRRFPLFSFAKG
VMKGGSKQEDAWMTPFVKQFSSVGFSRDSPEENTQSNKTDLSGGMLQDKRVEIDKHGLNI
GDYNRAVGKGPGPRPQAPKDAPVERSPYFDKDSAVADEPPSLPFLSGPSVKLPPPSSAVP
GQALGPVAGLGTQTLGSVRQNSSPSVFGAGGAAAQARGLQQPPAPPLSSSQPGLRAQVPP
PLLSPQVPVSLLKYAPSGSGLSPLFGPQQAAMLNQLSQLSQLSQLSQLQRLLAQQQRVQT
QRSVPSGSRQQPDQQGRPLSVQQQMMQQSRQLDPSLLVKPPPPCQPPAVKPFLDAAAPHS
APELHKGPSPGSAFSSFPIGLNSNLNVNMDVNSIKEPQSRLRKWTTVDSISANTSLDQNS
SKHGAISSGFRLEESPFVPYDFMNSSASPASPPASAGDGWPRAKSPSGSSSANWPPEFRP
GEPWKGYPNIDPETDPYVTPGSVVNSLSVNTVRGVDHLRDGSSGPSSSLNTTLPSTSAWS
SIRASNYNVALSSTAQSTSAARNSDPKLTWSPGPVANTSLAHELWKVPLPPKSITAPSRP
PPGLTGQKPPLSAWDPAPLRVGGGWGSADARYTPGSSWGESSSGRITNWLVLKNLTPQID
GSTLRTLCMQHGPLVTFHLSLPHGNALVRYGSKEEVVKAQKSLHMCVLGNTTILAEFASE
EEISRFFAQSQSLAPAPSWQSLGSGQSRLGPLDCSHPFSSHWNGAGLSGTSCGDLPGASL
WGGPHYSASLWGPPSSSDPSPINAFLSVDHLGGGGESM
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaaaggaaagaagaagacaggagaaagaagggagctgctccaaagaaggcc
actgaacaaaaactcaaagtgtcagaacaggcgaagcgcggtgtaagccagcctcagcct
gccggcgcgcctagcggcacttcctcggcacccagccctcgcggtcatgccagccgagcc
ccggccgacagcgagcagccacagcagccgccacggcaggagccacggcaggagccacag
ccgcctcagcagccaccacaggccttgtcccggttgcctcgcgaagtgccaccacgattt
cgccaccaggaacacagacagctcctaaagaggggtccgcattttcctgtcatagcagcg
accctggggtctgcggctcgggcgttaagcggccaggcagacccacagccaccaagtgac
ggagcggtgcggggcagccgagcccggccagacgtaaaccacaataattccggatcccac
tatgagaattcgcagtggggccctgcgtcttctccgagtgactccagcacaaactgtaag
aacgctgttgtgaacgacgcccccggagaagcagcatggccctcggtcccaggcgcggac
ccagagccggcttcagagtgtgtgggtgctgattctgcctccggctccgagtcagagaga
caccccgccaccatggcctcagggcgtgcgggtgagagggacggcctccgggacagcccc
gggctgggcccccagaacaagttcgtggtggccggcggtggcagcactgcgccctggggg
ttctcccacggagccgtcataagcacatgtcaggtccccgcggacgctcccgccagcagg
tcggaaagcggcagcaaggcagtgactgcttggggcgcggggagcccttcatcaaatgga
gggccgggtccgagcactttgcacccagctagcaaccacggtgcctggccagcgctggag
agcaatggacttgccccgagggggcctggggcgggcggtgctggcggcggcggccagtgc
agccctgcgggccaggcgcccggcagccagagtgtcagctcgaaagcgggggcctcttcg
accccgggggcctggggaagccttcaggagacttgtgactctgaagtcagtggtacacag
aaggcttcgttcagtggccaacctcagactatcgccactgaaacggccggaccaaataac
actactcacttcgcaacgtctagtttaccgagctccggtccagcccagagcggcgagcca
cccagcagcgcgggggcccggcgtgcgggcacggggcctcaccctcagaccccggccccg
cccgtcctgcacggcccctccctgcctcagctcagcaatggagagccccagggcgggggt
tcgcacggtactacgtggggcgcctacggggccagctactctggagacacgcgcgcgagc
cccaacggccaagctaacggtgacactgtgaacgcaactctaatgccgcccggcaccaac
gggccggtgggcgccaacttccaaggcaacacaagcaagaggggcggcgcgtgggagccc
ggggccgcgcattcccagagtgcgtcgtgggcaagcggaaacgggcctggttctggaggc
ggccggagaggctgggcggctcccgtgcagggcacgggcgccgaccccgccggcgtggag
tggggccagctgccgggcactcagcattccagtgacagcacgagcagcggtgctcagcgg
tttacgaacggatggaagtctgccgaggaggagggccagggctccgccccgcctcagccg
agcgagcagagcggcgtgtgggccaaagcgggaggagcaggggacagtgacgggagcgcg
gaaagcaccgggcgcccggaggacagagcgcccggggacggtcagagccgagagcggagg
aaggtcgacccgcacacgctgctgcagagcatcgtgaacagggccgacctggacccgcgc
gtcctgtccaactccggctgggggcagacgcccatcaagcagaacactgcctgggacacc
gagatgtcgccgaggggcgggagaaaggccgaccgcgggacagaggcctgggggggctcc
gcagcacagacgttcaactcagggccgtgcgccgacaagacgagccccggtggccacgat
tccgcatccggatcggggtggggcgagcccagaccccctctgaggtggggggacgccaaa
ggctccgactgccagggtgggtgggaggacgattctgtggctacggggacggtcaggagc
ggtcagtgggggcctcgcaaggaggagacgtctgcgtggggcgacttgcaaaagagcaag
cagggctggggcgacgggcagaagtcacagcaggggtggcctgcccccgccggggacgac
tggggggagacggccaggagcgaccactggggggaggccaataagacatccagctcaggc
ggcagcgacagcgacaggtccgtctccggttggaacgaactcggcagagccagttctttc
acttggggaaataacttaaaccccaacaactcgtcagggtggggcgagtcctccaaaccc
agtgccccccagggctggactgaccctgcaaaggccggtcagactctgggctggggcgag
gccaagcctgccagctccccagactggaacaagcagcaggacggcgtcgggtcctggggc
gccacgccggccccgggcaagccccccggcactggctggcggggagggcccatgccggtg
tccgccgggccggagcccacgggctgggaggagccgtccccagagtccatccggcgcaag
atggggatcgatgacggcacgtcggcctggggggaccctagcacatacaactgccggggc
gtcagcatgtggggccgcagcgcccctggcggccggccagaccagcaagcacaaggccat
cagctgctgccacccacaagtgccgtctccaaccaagaggccggcggctccggctggggc
gagccctgggcggagccccccacgccagccaccactgtggataacggcacttctgcgtgg
ggcaggcccgtggacagtggccctagctggggggaccccgttgccgcggcatccagcaca
cccgcgtggggctccagctctgctgctccgcaaggcctcggcaagcccgggcccaaatct
atgcaagatggctggtgtggcgacgacatgccactgcccgcaagccgccccccaggctgg
gaggaggaggaggacgtggagattgggatgtggactggtaactcatctcaagagcttaac
tcatctttgaactggccgccgtacactaagaagatgtcgtccaagggtctgagtggcaag
aaaaggaggcgggagaggaggcggccacggcgttttccgctcttttccttcgcgaagggg
gtgatgaagggcggcagcaagcaggaggacgcgtggatgaccccgttcgtcaagcagttc
tccagcgtcggtttctcgagagactcgccagaagaaaacacacagagcaataagacggac
ctttccggagggatgctacaggacaaacgggtggagatagacaagcacggcctgaacatc
ggcgattacaaccgcgcggtcggcaaaggccccggccctcggcctcaggcccccaaagac
gcccccgtggagcgcagcccttacttcgacaaggacagcgctgtggcagatgagcccccg
agcttgccgtttctgtccggtccgagcgtgaagctcccgcctcccagtagcgcagtgccc
gggcaggcccttggccccgtagcggggctgggcacgcagaccttgggctctgtcagacag
aacagcagccccagcgtgttcggagcgggaggcgcagcagcacaggcccggggcctgcag
cagccgccagcaccgcccctcagctcgtcgcagcccggcctccgtgctcaagtgcctcct
ccattactctcccctcaggttcccgtctcgttgctgaagtacgcgcccagcggcagtggc
ctcagtccgctcttcggcccccaacaggcggccatgctgaaccagctgtcccaactgagc
cagctttcccagctctcccagctgcagcggttgttagcccagcagcagagggtgcagact
cagagaagcgtgccttctgggagccggcagcagccagaccagcagggtcgacctctcagt
gtgcagcagcaaatgatgcagcagtctcgccagctcgacccgagcctgttggtgaagccg
ccgccgccgtgccagccaccggccgtgaagcccttcctggacgctgccgcgccccacagc
gcgcccgagctgcacaaagggccctcaccgggcagcgctttcagcagcttccccataggc
ttgaactcaaacttgaatgtaaacatggacgtgaacagtattaaagaaccccagtcacga
ctgaggaagtggacgacagtggacagcatttctgcaaacacgtctttggatcaaaactcc
agcaaacatggtgctatttcaagtggtttcaggctggaagagtccccgtttgtcccctac
gacttcatgaacagcagcgcttcaccagccagccctccagcgtcagcaggggatggctgg
ccacgtgccaaatcgcccagcggctctagcagtgctaactggccaccagagttccgccct
ggtgagccgtggaaaggctacccgaacatcgaccctgagactgacccttacgtcacccct
ggcagtgtcgtcaacagtctctcggtcaacactgtgcggggagtggaccacctcagggac
gggagcagcgggccctcctcatccttgaacaccacgctgccttcaactagtgcctggtcc
tccattcgtgcctccaactacaacgtcgccctcagcagcacagcacaaagcacttcagca
gccagaaacagcgaccccaagctgacgtggtcgcccggcccagtcgcgaacacctccctg
gcccacgagctgtggaaggtccctctgccacctaagagcatcactgccccgtcccgccca
ccgccggggctcaccggccagaagccacccttgtctgcgtgggaccccgctcctctccgt
gtgggcggaggatggggcagtgccgacgccaggtacaccccaggttccagctggggtgag
agcagctcagggagaatcacaaattggctcgttctgaaaaacctcacacctcagatcgac
ggctcgactctgcgcacgctgtgcatgcagcacggcccgctggtcaccttccacctgagc
ctgccgcacggcaacgcgctggtccgctacggctccaaggaggaggtggtgaaggcacag
aagtcgctgcacatgtgtgtgctggggaacaccacgatcctcgccgagttcgccagtgag
gaggagatcagccgtttctttgcacaaagtcagtccctggcccccgcccccagctggcag
tccctgggctccggccagagccggctgggccccctcgactgctcccaccccttctccagc
cactggaacggtgctgggctgtcggggaccagctgtggagaccttcccggcgcttccctc
tgggggggcccgcactactccgcgagcctgtggggccctccgagcagcagcgacccctcc
cccatcaacgcttttctctctgtcgaccacctgggcgggggtggggagtccatgtga
DBGET
integrated database retrieval system
