Pteropus giganteus (Indian flying fox): 120613195
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Entry
120613195 CDS
T07511
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
pgig
Pteropus giganteus (Indian flying fox)
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120613195
Enzymes [BR:
pgig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120613195
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
120613195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
COX4
Motif
Other DBs
NCBI-GeneID:
120613195
NCBI-ProteinID:
XP_039731718
LinkDB
All DBs
Position
Unknown
AA seq
1764 aa
AA seq
DB search
MASVTTMLNEKSSPNNRESESESDSEIDNDDDSETTESLFSFDQSEEEDHLSSEEDIIEE
PASGHLPCEFEINEEKPSEVEAIDVSSSDFERLCLTEYKKILNELSLLIWKTLSKSKMVN
LLQDFVESEFFLIDGDSLFITCVFNVNFKEGQTLHFFYIVEQFLHDFIQKEARFVIVFFK
DAENMYFNYPELLALRTILIQHLEYNTDVTIYTEFSNCLSPEWEIFLKECYPYFLIVSEE
GITPHQTDFLNIFIIHALYQKINIVPSSEIESDVLRIYGHYASSCYLHKQFFEKHEIQLR
HVLQVYIREYYQKSQETEIVLYGHLKLNLGYVQKEINQTLSLLQNLWPEGADIRSVVCSI
SCSVTLKLYKKMLHNAQDCENLNTGTENHNMQDLKKPPTLNEAADLCRMHCLSVIFLQHL
PLFQRAKSRIITYIWDRTLLPFLNMLKKCTFFILKQLKARNNWDVNFTGLPDLTDTSLWK
NIAYYYEIEYNRGLNLGLGDTLMQEYQKLWNMVLTLSGDEDFGGPIPIRTTTRLFLTQKE
TTPRGSNQEIQKLGLIPLKAEIIEDYAGDILSELPFLSSDDPAVISLSKKKEFDELRHWH
SFRLLSDDFERTRCNSDDPTPQTWNVRTQVFSNAEKFIEENQKRQLAKLEKREEERWNNL
SLHIEKEIKENFNSGIKRLENFLQTCPVKSVKFTAEMVGLDTCFKLWMECCLKPEAESRD
INIIINLMKKIYILHEKYSELLQNTHRQKLAKYLKYIGFDNLAYSLCPQVQESDTKKDIS
KYSVHMGAARFQLTHMSPYLFREERSDPDPRVHHFIPDTWQRELLDVVDNNESAVIVAPT
SSGKTYASYYCMEKILRESDEGVVVYVAPTKALVNQVVGTVYSLFTKTLPKGLVVCGVFT
RDYRHDTLNCQILVTVPQCLEILLLSPHRQQWVKRMRYVIFDEVHCLGGEIGAEVWEHLL
VMIRCPFLALSATISNPEHLTEWLVLIKRYWQHVESTMENSDPSQNALKVSKKQQRKRIE
KPSYRVRLVWYKERYNDLEKYVCSLKDNDFIIEHYHPCAALTVNHIKKYGIPLDLGFSPR
ESILLYDAMVHVWPEWTRMQELEPEEFSCFKNKIVITRADAKKYEEELKKEIIRWIQLDP
SKVNQLLKYLKPQNFDNLEIESQKMFPCFVEKLKEMDKLPAIFFSYNIHSVEILASRLLT
NLISKQITHNDPNSERKKKNLTKKLRKARSSQKRNISTFLNSDSGARIQRIILLAAEIKE
IKKNLKKYNEFSPDCTYTDSTVVDNQTLAKILLRLRGTRQGYKLHSLLKRGIGYHHGSME
YKQRQVVEMLFRQKHVKVVIATSSLALGINMPCKSVVFIEDSVFLNALNFRQMSGRAGRR
GEDLIGNVFFYGIPLPKIERLLKSNVPKLKGQFPLSISLVLRLMLLIAKADDKEDAKAKA
LSVLQHSLMSFKQPKIKCMLKFYFIYSLQFLATEGYLNSECIPTGYSGLVSHLHYHEPAN
FVLVSLLEKCLFHKLCIPINIDGQKTFSQDVMETLVVVLANLFGRRYLPPCVKNLKKKFA
HSVKILDALPKEFAAVVEEHNNRIRENFGSFLLSISNLADMRKEYQLPLSEIDFSSKECE
DSELVSHLMPGTESRTAVSPFACLSDITDQDLFDMDVVNDVMLRTIYVNVENVPFLSLVK
RNRNGRKCPLNGYALNFYKTGSLSALTVDNGLNMGDAFNLIRDFVLVIQSIRISLSELCD
DEDDNVVLAFKQLSEAFKTKLRKK
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtgactactatgttgaatgaaaaatcaagccctaataacagagaaagtgaa
agtgagagtgattctgaaattgataacgatgacgacagtgagaccacggagagcttgttt
tcatttgatcaatctgaagaagaagatcatctaagctcagaagaagacataatagaagag
ccagcttctgggcacttaccatgtgagtttgaaatcaatgaagagaagccttcagaagtt
gaagctatagatgtcagcagttctgattttgaaagattatgtttaactgaatacaagaaa
attctgaatgagctctcactgttaatttggaaaactctgtcaaaatctaaaatggtgaac
ttacttcaagacttcgttgagtctgaattttttttgattgatggagattcattattcatc
acttgtgtttttaatgtgaacttcaaggaaggacaaactcttcacttcttctatattgta
gaacaatttctgcatgatttcattcaaaaagaagccagatttgtaatagttttctttaag
gatgcagaaaatatgtattttaattaccctgagcttctggcccttcgtaccatattgatt
caacatttagaatataatactgatgtcactatttatacagaattttccaactgtttgtca
ccagaatgggagatatttcttaaagaatgttatccgtatttcctaattgtttcagaagag
ggaataactcctcatcaaactgacttcttaaacatttttatcattcatgctctttaccag
aaaatcaatattgtaccgtcttcagaaatagagtcagatgtccttagaatctatggacac
tatgcctcaagttgctatttacacaaacaattttttgaaaagcatgagatacaactgcga
catgtcttacaggtctacataagagagtattatcaaaaatcacaggaaacagaaatagtt
ctgtatggtcatttgaaactaaacttgggatacgtacagaaagagataaatcaaaccttg
tccttgcttcagaatttatggccagaaggagctgatatcagaagtgttgtctgctccatt
tcatgctctgtaacactaaaactctataaaaaaatgttacataatgcacaagactgtgaa
aacctaaacacaggcacagaaaatcataacatgcaggacttgaaaaaaccacctacacta
aatgaagcagccgatctttgcagaatgcactgtctcagtgtgattttccttcaacattta
cccctgtttcaaagagctaagagtagaatcattacttatatttgggacagaacacttcta
ccatttttaaatatgctaaagaaatgtacatttttcatcctaaaacaattaaaggctaga
aataattgggatgtgaatttcactggcctgcctgacttaactgatactagtttgtggaaa
aatattgcttattattatgaaattgaatataatagaggactaaatttgggattaggtgac
actttgatgcaggagtatcagaagttgtggaacatggtcttaacattatcgggggacgag
gatttcggaggacccatacccattaggacaacaaccagactgttccttacacagaaagaa
acaacacctagaggatcaaatcaagaaattcaaaaattgggactcattcctctgaaagct
gagattatagaagattatgctggagatattttgtcggaactaccttttctaagcagtgat
gacccagctgttatatctctttctaagaagaaagaatttgatgaactcagacattggcat
tcttttagacttctcagtgatgattttgaaaggactaggtgcaacagtgatgacccaacc
ccacagacgtggaatgtcagaacacaggttttcagcaatgcagaaaaatttattgaggaa
aatcaaaagagacaactagctaaactagagaaaagagaggaagaaagatggaataacttg
tccttacatattgaaaaggaaattaaagaaaattttaattctggaataaaaagactagaa
aattttctccagacatgccctgttaagtctgtaaaatttactgcagaaatggtaggattg
gatacctgtttcaaattatggatggaatgctgtttaaaaccagaagcagaatccagagat
ataaacataataattaatttgatgaaaaagatttacatacttcatgaaaaatattcagaa
ctactacaaaatacacatcgacaaaaattagccaaatatctaaaatatattggatttgac
aacttagcatactcattatgtcctcaggtgcaggaatcagatactaagaaggatatttct
aaatattcagttcacatgggagcagctcggtttcagttaacacatatgagcccttactta
tttcgagaagaaagaagtgatccagatcccagggttcatcattttatacccgacacatgg
cagagagaacttcttgatgttgtagataataatgaatctgctgtaattgttgccccgacg
tcatcagggaaaacctacgcttcttactactgcatggagaaaatcctgagagagagtgat
gaaggggtggttgtgtatgttgctccaacaaaggctcttgttaatcaagtggtaggaact
gtctacagtttatttaccaaaacattgccaaaaggattagtggtgtgcggagtttttaca
agagattaccgtcatgacaccttgaattgtcagatattggtgacagtacctcagtgtttg
gaaatactcttgctatcacctcatagacaacagtgggtgaaaaggatgagatatgtcata
tttgatgaggttcactgtcttgggggagaaattggagcagaagtttgggaacatcttctt
gtgatgattcggtgtccctttctggcactttctgctactatcagtaatcctgaacatctc
actgaatggttggtgttaattaaaagatactggcaacatgttgagagcacaatggaaaat
tctgatccatcacaaaatgccttgaaagtttcaaagaaacaacaaagaaaaagaatagaa
aagccatcatacagagttagactggtatggtacaaagagcgatacaatgatctagagaag
tatgtgtgttccctaaaggataacgactttatcattgaacactatcacccatgtgctgca
ctcacggtcaaccatataaagaaatatggaattcctttagaccttggattttctccacgg
gaaagcatattgctttatgatgctatggtacacgtttggccagaatggacaagaatgcag
gagttagaacctgaagaattcagctgcttcaaaaataaaatagtaatcacgagggcagat
gccaagaaatatgaggaagaactaaaaaaggagataattcgttggattcagctggaccca
agcaaggtgaatcaattattaaagtaccttaagcctcaaaattttgacaatctagaaatc
gaaagtcaaaaaatgtttccttgttttgtggaaaaacttaaagaaatggataagctgcct
gcaatatttttttcatacaacattcattcagtggaaatattggcttcacgacttcttacg
aatctgataagtaaacaaattactcacaatgatccaaattctgaaagaaagaagaaaaat
ttgaccaagaaactgagaaaagcaagaagttctcaaaaaagaaacatttctactttttta
aattcagattcaggcgctagaattcaaagaatcattttattggcagctgaaataaaagaa
attaaaaaaaaccttaagaagtataatgaattttctccagactgtacttatactgattct
acagttgtagataatcagactttagcaaagatcttactcagattgagaggaacaagacaa
ggctacaaactgcacagtctgttaaaacggggcattggatatcatcacggttcaatggaa
tataaacaaagacaagttgtagagatgcttttcagacagaagcatgtcaaggtggtaata
gctacctcctcccttgctttgggaattaatatgccatgtaaatctgttgtttttatagaa
gattctgtttttctgaatgccttgaactttcgacagatgtctggtcgtgcaggaagacgt
ggagaagatcttatagggaatgtgtttttctatggtattccgttacctaagatagaaaga
ctcttgaagtcaaacgtgcccaagctgaagggtcagtttcctctaagcatatccttggtt
ctcagactcatgctgttaattgccaaagcagatgacaaagaggatgctaaagcaaaggca
ttatctgttctccaacattcattgatgtccttcaagcaaccaaagatcaagtgcatgtta
aagttttactttatatattctttgcaatttttggccacagaggggtacctgaattcagag
tgtattcccactgggtattctggacttgtgtcccatttgcactaccatgaacctgcaaac
tttgttttagtaagcttgctggagaaatgtttatttcacaagttgtgtattccaatcaac
atagatgggcaaaagacattttctcaagatgtgatggaaaccttagtggtggtgttagca
aatctttttggaagacggtatcttcctccctgtgtgaaaaacttgaaaaagaaatttgct
cattcagtgaaaattctagatgctcttcccaaggaatttgctgcagtggtagaagaacac
aataacagaattagagagaattttggttcctttctcctatcaatttctaatttggctgac
atgagaaaagagtaccaattacctctctcagaaattgatttttccagtaaagaatgtgaa
gattctgaactggtctctcatttgatgccggggactgaaagtagaactgctgtctccccg
tttgcttgcctgtcagatataactgatcaagatttatttgatatggatgtggtaaatgat
gttatgctacgaacaatttatgtcaatgttgaaaacgttcctttcctttccttggtaaaa
cgtaatagaaatggaaggaagtgtccattgaatggttatgcattgaatttctacaaaacc
ggttccctgtcagcactcactgtggataacgggttaaatatgggagatgcttttaattta
atcagagattttgtactcgttattcagtccatcaggatttcactaagtgaattatgtgat
gatgaagatgacaatgttgtgttagcatttaaacaactaagtgaagcattcaagaccaaa
cttaggaaaaaatag
DBGET
integrated database retrieval system
