Pteropus giganteus (Indian flying fox): 120615601
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Entry
120615601 CDS
T07511
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
pgig
Pteropus giganteus (Indian flying fox)
Pathway
pgig03013
Nucleocytoplasmic transport
pgig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pgig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120615601 (UPF3A)
03015 mRNA surveillance pathway
120615601 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgig03019
]
120615601 (UPF3A)
Messenger RNA biogenesis [BR:
pgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120615601 (UPF3A)
mRNA cycle factors
P-body specific factors
120615601 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
120615601
NCBI-ProteinID:
XP_039734658
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MRSEKEGVAGPRAAVAARGQSRREKPSSVLVQFRRESPQREPGALLASSSSCGGSAGKPR
EEKRTVLSKVVIRRLPPSLTKEQLEEQLHPLPAHDYFEFFTADLSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFIDNKGLEYPAVVEFAPFQKIAKRRLKKKDAKTGSIEGDLEYKRF
LEAYSVEEEKTSTNPETLLGDIEAKTREHFGFGLQWILMIKARRTTPLLEYIKNRKLEKQ
RIREEKREERRRRELEKKRLREEEKRKRREEERCKRKEADKQKKTAEKEVRIKLLKKPEK
GGEAATEKTKEQGEEIDAGDGQREACPSCTVVKAKPWESTQDRRREKTGRPCSCTSQELA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggaaaaggagggtgtcgctggccctagggcggccgttgctgcgcggggtcag
agccggagggagaagccgtcgtctgtgttagttcagttccgccgggagtcgccgcagcga
gagcccggggcgctgctggcttcgtcctccagctgcgggggcagcgcaggcaaacctcgc
gaggagaagaggacggtattgagcaaggtggtgatccggcgccttcctcccagcctcact
aaggaacagctggaagagcagctccacccactacctgcacacgattactttgagttcttt
actgcggatctcagtctttatcctcatctctactcaagagcctacattaattttagaaat
cctgatgacatccttctttttagagatcgttttgatggatatatcttcattgacaataaa
ggccttgaatatcctgcagtggtagagttcgctccgttccagaagatagccaaaaggagg
ctaaagaaaaaagatgccaaaactggaagcattgaaggtgatctggaatataagaggttt
ttagaagcttactctgtggaggaagagaaaactagtaccaatcccgaaactcttttggga
gacatagaagcaaagacaagagaacattttggttttggccttcaatggattcttatgatc
aaggctagaagaaccacacctcttttggaatacattaaaaatagaaaattagaaaagcag
agaattcgagaagagaagcgagaagagcggaggaggagggaattggaaaagaaacgttta
cgggaagaagaaaaaagaaagagaagagaggaggaaagatgtaagagaaaagaagcagac
aaacaaaagaaaactgctgagaaagaagtaaggattaagcttcttaagaaaccagaaaag
ggaggggaagcagctactgagaaaacgaaagaacaaggagaggaaattgatgctggagat
ggacaacgggaagcctgccctagctgtactgttgtgaaggccaagccctgggagagcaca
caggacaggcgcagggaaaagactggccggccttgcagctgtaccagccaggagcttgca
tga
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