Panacibacter ginsenosidivorans: FRZ67_11590
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Entry
FRZ67_11590 CDS
T06131
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FRZ67_11590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgin03021
]
FRZ67_11590
Transcription machinery [BR:
pgin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FRZ67_11590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
GerE
PaaA_PaaC
Motif
Other DBs
NCBI-ProteinID:
QEC67910
UniProt:
A0A5B8V8P2
LinkDB
All DBs
Position
complement(2744942..2745532)
Genome browser
AA seq
196 aa
AA seq
DB search
MINDLLNIQQGIANGNELMLGELYKLFHKKLQHFSRAITRSDEIAEEVVDDVFVKLWNRR
GKVAEIENITVYLYIAIKNQSLNALSRKAQQLVSESFDYLDIEIEEAIGDPEVLMITEEM
MHRMQKAVEDLPPRCKMVFKLVREDGLKYKEVSQILNISVNTIDVQMAIAIKRICTALQL
EKPKRNFTSTATEKKV
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgataaatgatctgcttaacatacaacagggcattgctaatggcaatgaattgatgctt
ggagaattgtataaactctttcacaaaaagctgcagcatttttcaagagcaataacaaga
agcgatgaaattgcagaagaagtggtggatgatgtttttgttaagttatggaacaggaga
ggaaaagttgcagagatagaaaacatcaccgtttatttatatatagctataaagaatcaa
tcattaaacgctttatcccgcaaagcgcagcaacttgtatctgaatcattcgactacctg
gacatagaaattgaagaagcgataggggatccggaagtattaatgatcacggaagaaatg
atgcatcgaatgcaaaaggcagtcgaagatctgccaccacgctgcaagatggtttttaaa
ctggtaagagaagatggattaaaatataaagaagtttctcaaatacttaatatctcggta
aacactattgatgtgcaaatggctatagccataaaacgaatttgcacggcgcttcagctt
gaaaaaccaaaacgcaattttacttccaccgccaccgaaaaaaaagtgtaa
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