Panacibacter ginsenosidivorans: FRZ67_12135
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Entry
FRZ67_12135 CDS
T06131
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin00521
Streptomycin biosynthesis
pgin00523
Polyketide sugar unit biosynthesis
pgin00541
O-Antigen nucleotide sugar biosynthesis
pgin01100
Metabolic pathways
pgin01110
Biosynthesis of secondary metabolites
pgin01250
Biosynthesis of nucleotide sugars
Module
pgin_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FRZ67_12135 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FRZ67_12135 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FRZ67_12135 (rfbC)
Enzymes [BR:
pgin01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FRZ67_12135 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
FdtA
Motif
Other DBs
NCBI-ProteinID:
QEC68015
UniProt:
A0A5B8VA70
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All DBs
Position
complement(2872300..2872851)
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AA seq
183 aa
AA seq
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MRIEETPLKDCYIIHDTVFEDSRGYFFESFNQQKFTALTGIANPFVQDNQSRSVRGVLRG
LHFQRGEHAQAKLVRVLQGSVLDVAVDIRKDSPTFGKHFAMELSDTSKTQLYIPRGFAHG
FIVLSDTAVFFYKCDNVYNKQSESGIIYNDPALGIDWKLDEASLLLSEKDKVNPLLKDIT
ETL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgaggaaacaccacttaaagattgttacattattcatgacaccgtttttgag
gacagccgtggttatttttttgagagttttaaccagcaaaaatttacagcgcttacagga
atagcaaatccttttgtacaagacaatcaatcacgctcagttcgtggtgtattgcgtggt
ctgcattttcagcggggagaacatgcgcaggcaaaactggtgcgtgtattgcaaggctca
gtgttagacgttgctgttgatataagaaaagattcgccaacattcggaaaacattttgca
atggaattgtctgacacatcgaagacacaattgtatataccacgtgggtttgcgcatgga
tttattgtattgagcgatactgctgtttttttttataaatgtgataatgtttacaacaag
caatctgaaagtggtattatttataacgacccggctttgggtattgactggaaacttgat
gaagcctctttattactaagtgaaaaagataaagtaaatcctttattaaaagacattact
gaaactttataa
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