Paraburkholderia ginsengisoli: I6I06_08515
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Entry
I6I06_08515 CDS
T07246
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pgis
Paraburkholderia ginsengisoli
Pathway
pgis00521
Streptomycin biosynthesis
pgis00523
Polyketide sugar unit biosynthesis
pgis00541
O-Antigen nucleotide sugar biosynthesis
pgis01100
Metabolic pathways
pgis01110
Biosynthesis of secondary metabolites
pgis01250
Biosynthesis of nucleotide sugars
Module
pgis_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
I6I06_08515 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
I6I06_08515 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
I6I06_08515 (rfbC)
Enzymes [BR:
pgis01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
I6I06_08515 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QQC62388
UniProt:
A0A7T4T7G2
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All DBs
Position
1:complement(1937950..1938501)
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AA seq
183 aa
AA seq
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MAIQVTATALPEVKIIEPKVFGDARGFFFESFNALEFAGKVEAGVEFIQDNHSRSAKGVL
RGLHYQIEHAQGKLVRVVEGEVFDVAVDIRKSSPNFGKWVGVHLSVENHRQLWVPPGFAH
GFVVLSESAQFLYKTTDYWFPEHERSIVWNDPAIGIEWPIDFEPLLAAKDAAGKRLAEAD
VYA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggccatccaggtaaccgcaaccgcgctgcccgaagtcaagatcatcgagccgaaggtg
ttcggcgatgcgcggggcttcttcttcgagagcttcaatgcgctcgagtttgccgggaag
gtcgaggcgggcgtcgagttcattcaggacaaccactcgcgctccgcgaaaggtgtgctg
cgcggcctgcactatcagatcgagcacgcgcaaggcaaactggtgcgtgtggtcgaaggc
gaagtgttcgacgtggccgtcgatatccgcaagagctcgccgaatttcggcaagtgggtc
ggcgtgcatctgtcggtcgagaaccatcggcagctgtgggtgccgcccggtttcgcgcat
ggcttcgtcgtgctgtccgagtcggcgcagtttctctacaagaccaccgactactggttc
cccgagcatgagcgcagcatcgtctggaacgatcctgcgatcggcatcgaatggccgatc
gacttcgagccgctgctcgcggcgaaagacgcggcgggcaagcggctggcggaagcggac
gtgtatgcatga
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