Pedobacter gandavensis: QG516_00015
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Entry
QG516_00015 CDS
T09013
Name
(GenBank) efflux RND transporter permease subunit
KO
K03296
hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
QG516_00015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
OEP
SecD_SecF
DXPR_C
Motif
Other DBs
NCBI-ProteinID:
WGQ10039
LinkDB
All DBs
Position
complement(1984..6531)
Genome browser
AA seq
1515 aa
AA seq
DB search
MFEQFIKRPVLSLVISLFITLLGLLALFTLPVTQFPDIVPPSVVVTANYTGANAEVSTNA
VAIPLERAINGVAGMTYMSSVSTNNGTTLIQVFFKVGTDPDIAAVNVQNRVTTVLDELPE
EVIKAGVTTEKEVNSMLMYLNIYSDDKTADERFIYNFTDINILKELKRIEGVGFAQIMGL
RDYAMRVWLKPDRLAAYNISSDDVIAALRKQNVEAAPGQTGIGSDKSINMQQYVLRYPGK
FSEAEEYKNIPIRANADGSIIRIKDVADVEFGSLDYEMVSKTDGRPSASIMLKQLPGSNA
QEVIKNVKERMAALQENSFPPGMKYTMGYDVSRFLDASISSVLITLLEAFILVFIVVFIF
LQDFRSTLIPALAVPVCLIGALFFMQMLGFSINLLTLFALVLAIGIVVDNAIVVVEAVYS
KMEEEHLQPREATIAAMKEVGKPVVAITLVMSAVFIPVAFLSGPVGIFYRQFSLTLASAI
IISGINALTLTPALCAIILRSPHDKPAAKGWMARFFAGFNRAYNRMAGGYKGFLTRIAGR
RILTFGLLIAFFITTWGMSSILPSGFIPTEDQGMIYVNVTTPPGATVDRTESVLNEIDAI
SRKMQAVETVSTLAGYSLVNEVSGASYGMGMINLVAWKDRKESVTDMIENLKKATSHIMD
ADIEFFPPPTVPGFGNSSGFELRLLDKTGADDLNRTSEVMKKFIEDLKATPEIGNVFTTF
DVSFPQYLIKVDHDLAAKKGISVENAMNTLQTLMGSYYATNFIRYGQMYKVMVQAGPNYR
EKPEDVLNLFIKNDQGETMPFSTFITMERVYGPEQITRYNMFSSAMLNGDAAAGFSSGQA
IDAVEAVANKLPTGYEIEWSGMTREQILSGNQALYIFALCLLFVYLILAAQYESFLLPLP
VLLSLPAGIFGAFLFLWMFGLENNIYAQVALVMLIGLLGKNAILIVEYAIIKQEQGMTFL
NAAIEGSVARLRPILMTSFAFAAGLVPLMIATGAGALGNRSIGTAAVGGMIIGTVVGVIV
IPGLYVLFSSLMKKKAGASAKVVIAITAVMLISSCSMKKDIPVYEHQTLPESFQTSKDTV
TVAHTGWKEFFKDEQLISLIETALANNTDMKQTLHHIELAKANLRMRKGAALPNIDLAIE
GGLRKYGFHTADGIGNYDTNFSPNLKPGEQVPNPLPDYFIGFRTSWELDLWGKLKNKKQA
AVHKFLASYEGQKLVQTELISNVSAAYFELLALEEELQILSRNIQLQQNGLKLIQVQKEA
GVATELGVQQFKAVLANSRGKAQEVLQQQLLMQNHLNFLTGKFTAVISLKKNGLEEFNSS
STLATGTPLQMIALRPDIRQAGLELIASQKETKAASAAFLPAIVLAPQIGLQSFDLGKLF
QPQTALAYGLMGGITAPIFNQHRIKAEYESYKAYYGIAFQNYEKIVLKAYNEVQDAVKSQ
AFIKAKREYLSEEVKALNASVKAANALFLAGRVTYLDIITTQRNVLEAEINEVLAKKQEV
LNQISIYKALGGGWK
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacaatttataaaacgaccggtattatcactggttatttccctatttatcacc
ctgttgggtttactggcgctatttaccttgccggttacccaattcccggacatcgttccg
ccttccgtagtggtgacggccaattataccggtgcaaatgccgaagtaagtaccaatgcc
gttgcgattcctctggagcgggccatcaatggcgtagccggaatgacctacatgagttct
gtgtctaccaacaacggaactaccctgatccaggtcttctttaaagtgggtaccgaccca
gatattgcggcggtaaacgtgcagaacagggtcactaccgtgctcgatgaattgcctgaa
gaggtgatcaaagccggagtaacgaccgaaaaagaagtcaacagtatgctgatgtatttg
aatatatacagcgacgacaaaactgcagatgagcgctttatctacaactttaccgacatc
aatatcttaaaagaattgaaacgaattgaaggtgttggttttgcccagatcatgggttta
agggattatgcaatgcgtgtttggctgaaacctgatcgccttgcggcttacaacatctct
tctgatgatgtgattgcagccctaaggaagcaaaatgtggaagccgcccccggacaaacc
gggattggttctgataaatcaatcaacatgcagcaatatgtattgcgttacccaggtaag
ttttcggaagctgaagagtacaaaaacattcccatcagggcaaacgcggatggttctatc
atccggattaaagacgtagcagatgtggagtttggttcactcgactatgagatggtctct
aaaacggatggcaggccctctgcttcaatcatgttaaaacaattgccaggatcaaacgct
caggaagtcattaaaaatgtaaaagagcggatggctgctttacaggagaactctttcccc
ccgggtatgaaatacaccatgggttacgacgtatccagattccttgatgcttctatatca
agtgtattgatcaccttacttgaagcgttcatactcgtattcattgtagtatttatcttc
ctgcaggatttccgatccaccttaattccagcgctggcagttccagtttgtctgattgga
gccttgtttttcatgcagatgctgggcttctcgatcaacttactaacgctgtttgcactc
gtgttagcgattggtatcgtggtggataatgccattgtagtagtggaagccgtgtactcc
aaaatggaagaagaacacctgcagccgagggaagccaccattgctgcgatgaaagaagtg
ggtaaaccggtggtagcgatcaccctggtgatgtcggcggtatttatcccggtcgctttt
ctttccggtccggtgggtattttttaccgacaattctccttaacactggcttccgcaatt
atcatttccggaatcaatgccttaacattaactcctgcgctatgtgcgatcattttgcgc
tctccacatgacaaaccagctgctaaaggctggatggccaggttctttgcaggctttaac
agggcttacaatagaatggcgggcggttataaaggttttttgaccagaatcgcaggtcgg
agaatcctgacttttggattgctgatcgcgttctttatcaccacctggggcatgagcagc
atcctgccttccggatttatcccaacagaggatcagggcatgatttacgtgaatgtaacc
actcctccaggagcaacagtagacaggacggaaagcgtgctgaatgaaattgatgccatc
agcagaaaaatgcaggccgtagaaactgtttccacccttgcaggatatagcctggtgaat
gaggtttccggtgcttcttatggtatgggtatgatcaaccttgtggcctggaaagaccgt
aaagaatctgtaactgacatgattgaaaaccttaaaaaggcgacttcacatatcatggac
gcggatattgagttcttccctccgcctactgtacctggttttgggaactcttcaggcttt
gaactccgccttttagataaaaccggtgcggacgacctgaacaggacttctgaggtgatg
aagaagttcattgaagacttgaaagcgaccccggaaatcggcaatgtatttaccactttc
gacgttagtttcccgcaatacctcatcaaagtagaccatgatttagcggctaagaaaggc
atcagcgtagagaatgcgatgaacacccttcaaaccttaatggggagttattatgcaacc
aactttattcgttacggacaaatgtacaaggtgatggtacaggcaggccctaattaccgg
gagaaaccagaggatgtgttaaaccttttcattaagaatgaccagggagaaaccatgcct
ttctctacatttattacgatggaacgcgtttatggcccggagcaaattacgcgttacaat
atgttctcttcggcaatgctgaatggtgatgctgcggctggtttcagcagcgggcaagcg
attgatgctgtagaggccgtggcgaacaagcttcctactggttacgaaattgagtggtct
gggatgacaagggaacagattctttccggaaatcaggctttatacatctttgcactgtgt
ttattgtttgtttacctgatccttgccgcacaatatgaaagcttcctgctgccattgcca
gtattgctttctttgccggcaggtatttttggtgccttcctgttcttatggatgttcgga
ctggaaaacaatatttatgcgcaggttgcgctggtgatgctcatcggtttactcggaaaa
aatgcgatcctaatcgtcgagtatgccattattaaacaagaacaaggtatgactttctta
aatgccgcaatagaaggctccgttgcccgtttacgccctattttaatgacctcttttgct
tttgcagcaggattggttcctttaatgattgctaccggtgcaggtgcattaggtaaccgc
tctatcggaacagccgctgtaggcggaatgattatcggtactgtggttggtgtaattgtg
atcccaggcctatatgtactcttttcctctttgatgaaaaagaaagctggagcgagtgct
aaagtggtcatcgccattaccgcagtgatgttgatcagcagctgctcgatgaaaaaagac
atcccagtgtacgaacatcagacacttccggaaagcttccaaaccagtaaagacacagtg
accgttgcccataccggatggaaggaattctttaaagatgagcagctcatttctttaatt
gaaactgctttggccaataatacggatatgaagcaaaccttgcaccatatcgagctggcg
aaagcaaacctaagaatgcgaaaaggtgcagcactacctaatatagaccttgcaattgaa
ggaggattaaggaaatatggttttcacaccgcagatggaattggtaattatgacaccaat
ttctcccctaatctgaaacccggagagcaggtacccaacccacttcctgactatttcata
gggttcagaacctcttgggagctggatttatggggtaaactgaaaaataaaaagcaggcg
gctgtccacaagtttctagcttcttatgaggggcaaaagctggtacagacggaactcatc
agcaacgtatccgcggcctattttgagctgctggccctggaggaggagcttcagatttta
agcagaaacatccagctgcagcagaacggattaaaactgatccaggttcaaaaagaagcc
ggtgtggctactgaattgggcgtgcagcaattcaaagcggtgcttgccaattctagaggt
aaagcacaggaagttttacagcagcagctgctcatgcaaaatcacctgaactttctgacg
ggaaaatttactgctgttatttccttaaaaaagaatggattagaagaattcaattccagc
agcactttagcaacaggcacgcctttacaaatgattgctttgaggcccgacatcagacag
gcaggactggaattgattgcatcgcagaaagaaaccaaggccgcaagcgcagcattctta
cctgcaattgtactggcgcctcagatcggattgcaatcttttgacctgggtaagttgttt
cagccacaaacggctttagcttatggtttgatgggtggtatcactgctcctatttttaat
cagcaccgtataaaagcagaatatgagagctacaaagcatattacggtatagcattccaa
aattatgagaaaatcgttctgaaggcttacaatgaagtacaggatgcagtgaaatcacag
gctttcattaaagcaaaaagagaatacctatcggaagaagtgaaagcgttaaatgcttcc
gtaaaagcggccaatgcgttgtttttagcaggaagggtgacgtatctggacatcattacc
acacaaagaaatgttttagaggcagaaatcaatgaagttcttgccaagaagcaagaagta
ttgaatcagatatctatttacaaggccttaggaggcggttggaaataa
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