Pedobacter gandavensis: QG516_05725
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Entry
QG516_05725 CDS
T09013
Name
(GenBank) transglycosylase domain-containing protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00550
Peptidoglycan biosynthesis
pgj01100
Metabolic pathways
pgj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QG516_05725
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QG516_05725
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgj01003
]
QG516_05725
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgj01011
]
QG516_05725
Enzymes [BR:
pgj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
QG516_05725
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QG516_05725
Glycosyltransferases [BR:
pgj01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
QG516_05725
Peptidoglycan biosynthesis and degradation proteins [BR:
pgj01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
QG516_05725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WGQ11154
LinkDB
All DBs
Position
1349113..1351584
Genome browser
AA seq
823 aa
AA seq
DB search
MFKEIRNKYIRYISIFIYCIIIFFCALQLNFLWLFGYSPSYKDIKAPTQSVGSELYTADG
KLIGRYYKENRTPVSFKEISPSVIEALIATEDVRFYSHMGIDFRSLLSSGISTATGDKRG
ASTITQQLAKNLYRTRYNKSQGVIKHIPIVRTIVSKLKEWMTAVKLESNYSKNDIITMYL
NTVSFGNNTFGIKTASRVYFDKGPNELQVPESALLVGMLKGTSIYNPLRNPDKALERRNV
VLAQMNKYNYINKQQLDTFKNTPIKLKEGSIEEGGDGDSYLRAAVDKYLEKWADDNDYDL
YEDGLKIYTTIDSKLQKYAEEAVADQMKIIQKRFYSVWGNEDPWQDSEKKKVDYPDRAMR
KLPIYALLEKKYSNSPDSVKAYFNKKKKMKIFTWKGDRDTLFSTMDSIRYYGKIMNAGMM
TMDPFSGKIKVWVGGIDHKFFKYDHVNQSKRQAGSTFKPFAYLAALEAGMSPCDKFTDKP
VKIAYQEKGKTEYWEPKNADWNYSYREMSLRWAMGKSVNTITAQVTEAVGADNVVKWAKE
CGIESPLQAVPSVSLGPNDVSVFEMVRAYSTFLNEGVRTDPILVEKITDQDDNIIEDFKA
KTKRVLSEEIAWLMLYMLRGGMEEPGGTSQALWEWDLWKKGNQIGGKTGTSSDYVDAWYM
GVTKDLVTGVWVGCDERTAHFNNGETGEGSRTALPIFAKFMEKVYHDPSTGYTYGPFPKA
KVKITRTIDCPSPRIKVDTATTDSLAVDSTSFDAPLTDDQQPVVKEEDIIKTEDKKTPEP
VKQPATEVPLTRKEKREQRKKEREEEKEKERIKKEQEKNKPAK
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagaaatccgcaataagtatattcgctacatcagcatattcatatattgcatt
atcatattcttctgcgccctgcagctcaacttcttatggctatttggctactccccatct
tataaagacattaaagcacccactcaaagtgtaggctctgaactttatactgctgatgga
aaactgatcggccgttattacaaggaaaaccgtacaccagtgagctttaaagagatctcg
cccagcgtaattgaagctttaattgccacggaagacgttcgcttttatagccacatgggc
atagatttccgctcattattatctagtgggatttctaccgctaccggcgacaaacgtggg
gcaagtaccatcactcaacagctggcaaaaaacctttaccgcaccaggtacaataaatca
caaggagtgattaaacatatcccgatagtccgcaccattgtttccaagttaaaagaatgg
atgactgccgtaaaactggaatccaattattctaaaaatgacatcatcacgatgtacctc
aatacggtctcttttggtaacaacactttcggcataaaaactgcctccagagtatatttt
gacaaaggcccgaatgaacttcaggtaccagaatctgcattgctggtaggaatgcttaag
ggaacttccatttacaatcctttgagaaatccagataaggcactggaacgcagaaatgtg
gtactcgctcaaatgaacaagtacaactacatcaataagcaacaattagacacctttaag
aataccccaatcaaacttaaagaaggtagcattgaagaaggtggcgacggagattcttat
ttacgtgcggcagtcgacaaataccttgaaaaatgggcagacgataatgactacgacctt
tacgaggatggtctaaagatctataccaccatcgattcaaagctgcaaaagtacgctgaa
gaagctgtggcagatcaaatgaaaatcattcagaaaaggttttatagtgtctggggtaat
gaagacccatggcaggattctgaaaaaaagaaagttgactaccctgatcgtgccatgcgc
aaattgccgatctacgcattattagaaaagaaatacagtaacagcccagattctgttaaa
gcctacttcaataaaaagaagaagatgaaaatctttacctggaaaggcgatcgtgatacc
ttgttctctaccatggattctatccgctactacggaaaaatcatgaatgccggaatgatg
accatggacccattcagtggtaagatcaaagtttgggtgggtggtatcgaccataagttt
ttcaaatacgaccacgttaaccaaagtaaaagacaagcaggatctaccttcaagcctttc
gcctacctggccgcattggaagcgggaatgagtccttgcgataaattcacggataaacca
gtaaaaatcgcttaccaggaaaaaggtaaaacagaatactgggagcctaaaaatgcagat
tggaactacagctacagagaaatgtctctgcgctgggccatgggtaaatctgtaaatacc
attaccgctcaggttaccgaagctgtaggtgcagataatgtagtgaaatgggcaaaagaa
tgtggtattgaaagtccgctgcaagccgtaccatctgttagccttggtccaaacgacgtt
tccgtttttgaaatggtaagggcctacagtaccttcctgaatgaaggagtaagaacagat
cctattttggtagagaaaattaccgatcaggacgacaacatcattgaagactttaaagcg
aaaacaaaaagagtactttctgaagagattgcatggctgatgctgtacatgcttcgtgga
ggtatggaagaaccaggaggaacatctcaagcgctttgggaatgggatctttggaaaaaa
ggcaaccagattggtggaaaaaccggtacttcttcagactatgtagatgcctggtatatg
ggggttactaaagacctggtaaccggtgtttgggtaggatgtgacgaacgtaccgctcac
tttaacaatggtgaaacaggagagggttcaagaaccgccttacctatctttgctaaattc
atggaaaaagtttaccatgatcctagtacaggatatacctacggtcctttcccgaaagct
aaagtaaaaattaccagaacaattgattgtccaagtcctagaataaaggttgataccgcg
actacagatagtctggcggtagattcaacgagctttgatgccccattaacggatgatcag
caaccagtagtaaaagaagaagacatcatcaaaacggaggataaaaagactccagaacca
gtaaaacaacccgctactgaagttcctctgaccagaaaagaaaaaagagagcagagaaag
aaagaacgtgaagaagaaaaagagaaagagcgcataaaaaaagaacaagaaaaaaataaa
cctgctaaataa
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