Pedobacter gandavensis: QG516_06135
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Entry
QG516_06135 CDS
T09013
Name
(GenBank) TonB-dependent receptor
Organism
pgj
Pedobacter gandavensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
STN
CooC_C
MetallophosN
FecR_C
DUF6476
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
WGQ11233
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All DBs
Position
1458585..1461986
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AA seq
1133 aa
AA seq
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MKERLHSKVISPYGQKTVRKVFIIMKLSLIILITLGIQVSTASYGQRVTISKRNTSLKSV
LQDLRKQTGYYFIYNNEVISQSKPLNVDLKNTALSTALTEIFKDQPLTYTMEKNIIVLKL
KEAALKTPLAAANLITIQGKVTDDKGIPLPGVTILVKEGKAVAITNADGFYKIQAEDNQT
LIFSYLGFKREEVAIQKRTQINVSMTMSMSELSEAVVIGYGTQQKKLLTGAIGVIKGEEL
TQSPAVNVSNTLMGRVTGLVSYMSTSGTPDRDRSSIKIRGMGEALIVIDGVAREGMGIVG
MEMDKLDPNSIESISVLKDASAAVYGARGANGVILITTKRGKSNKVSMNYNGNFGIQQST
RLPKFLDSYNYAILNNEMFDNDKAEKGSSPRTKYTPEEIQKFKDGSDPDRYPNTDWYKTV
LKDYASVQKHNLSLNGGGNNSRYFISGTYTDQQGLISTSGMKRYGLVSNFDLDVTPTTSL
SVGLNYITENAKNPAVYAESIFSRMSVLGSVSPARFSNGLYAFSGFSGNPLADALEGAGY
NKVGRNIFTSSLRITQQLPFIKGLSANGVVTVDKNNSLTKAFTVPYPVYSLDPLKDEYTQ
QNATEKASLSETVSLNDNVNVQVSLNYKRLFGKHSVTALALYEQNEFKGENIIAERSNYP
VASVDQLFLGDVSTQKSSGSSQENARQSAVARFIYNYNSKYILESNFRYDGSPYYPKGKR
RALFPSLSAAWVLSEEDFIKDHYPFINELKLRTSYGKLGNDGGSLYSYFYNYSLFPAGYV
FGTGNGISPMTRITNTTVPNTNITWEKVKAFDIGIDALLWAGKLGIEADYYSKSKYDILR
SRGYDVPSTFGLSPALENFGKEYYYGYELALSHQSNIGQVNFSARLNMTFTKSRVVDYGE
NESVLPGLRQEGRPVGAARILKADGIFRDQQDVDNWPKYLTSPGATPVSGKPGDIRYVDL
NGDGVVELFSGSADRDVETKYIVPPTVYGLSLAFKWKNFSADALFQASTGVYINYAPAAD
LTNFYELHLDRWTPEQTDAAYPRLLSNYEANRYPSTFYVKNGNYIKLRTAQLSYSIPKTV
LRQIGVSSLTLTAQGQNLFTISNNKRFDPESSGTFANSYPPQRIFSFGLRLGL
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacgactacattctaaagtcatttccccttatggccaaaaaaccgtaagaaaa
gtattcattatcatgaaactatcactgattatcctgattaccttgggtatacaggtaagt
acggcttcctacgggcagcgcgtcaccatttctaagcgtaataccagcttaaaatccgtt
ttgcaagacctgagaaagcaaaccggttattattttatctacaataacgaagtcatcagc
cagtccaaaccattaaatgtggatttgaaaaacacggctttgagcacggcgctaacagag
attttcaaagatcagcccctgacctatacgatggagaaaaacatcatcgtcctgaagctg
aaagaagcagcattgaaaacaccacttgcagcggcaaacctcatcacgatccaaggtaaa
gtaaccgacgacaaaggcattccactgcctggtgttacgattttggtgaaagaaggaaaa
gcggtggccatcactaacgctgatggattttacaaaatccaggcagaagacaaccagacc
ctaatcttttcttatctaggcttcaaaagagaagaagtcgctatccaaaagagaacacaa
atcaatgtatccatgacgatgagcatgagtgaattgagcgaagcagtagtcattggatac
ggtacacagcaaaagaaactattaaccggggcgatcggtgtgatcaaaggagaagaattg
acgcaatcaccagccgtaaacgtatccaatactttaatgggcagagtaaccggattggtg
tcgtacatgagtacttcaggtactccagaccgcgaccgctcttccatcaaaatccgtgga
atgggtgaagccctgatcgtgattgatggagtagccagggaaggtatgggcattgtaggt
atggagatggataaattagatcccaattctatcgaaagcatcagtgtgttaaaagatgct
tcggcagctgtttatggtgccagaggtgccaatggggtgatcctgatcaccaccaaacgc
ggaaaatccaataaagtatccatgaattacaatggtaatttcgggattcagcaatccaca
agactgcctaaattcctggattcttacaactatgccattttgaacaatgagatgttcgac
aatgataaggctgaaaaaggaagctctccaagaacaaaatatacccctgaggaaattcag
aaattcaaagatggatcagatccggatcgttatcctaacactgactggtacaaaaccgta
cttaaagattatgcgtctgtacaaaaacataacctgagtttaaacggtggcggcaacaat
tccaggtactttatcagtggaacttacaccgatcagcaaggactcatcagcacttcagga
atgaagcgttatggtttagtcagtaattttgacctggatgttacgccaactaccagcctt
tctgtaggtttgaattacatcactgaaaatgcaaaaaacccagccgtttatgcggaaagt
attttcagcagaatgtcggttttgggatcggtatcccctgcccgtttttccaatggctta
tatgctttctctggattttcaggcaatcctttagcggatgcattggaaggtgccggctat
aataaagtaggcagaaacatctttaccagctcccttagaattacacagcagctgcctttt
atcaaaggtctttctgcgaatggagtggtgacagttgacaagaacaactcattgacaaaa
gcatttacggtaccttatcctgtgtattcattagatccattaaaggatgaatatacccag
caaaatgcgacagaaaaagcttcattgagtgaaactgtttcgctgaatgacaacgtaaac
gtacaggtttccctgaactacaaaagactatttggcaagcattccgttacggcattggct
ttatatgagcaaaatgagttcaaaggagaaaacatcatcgcggaaagaagtaattacccg
gttgccagtgtggaccagcttttccttggcgatgtaagcacccaaaaaagctcaggcagc
tcgcaggaaaatgcacgccaaagtgcagttgcccgttttatttacaattacaacagcaaa
tatattttagaaagtaacttcagatacgatggctccccttattatccaaaaggaaaaaga
agagctttgttcccgtctttatcagcggcttgggtcctatcagaagaagatttcattaaa
gatcattatcccttcatcaatgagttgaaactccgtacttcttacggtaaacttggtaat
gatggtggttccttgtattcttacttttacaactacagtcttttcccggcaggttatgta
tttggcactggaaatggcatctctcctatgaccaggatcaccaatacgaccgttccaaac
accaatattacctgggaaaaagtaaaagcttttgacatcggtatagatgccttgttatgg
gctggtaaactggggatcgaagcggattattacagcaaatccaaatatgacatcctgcgt
tccagaggttacgacgtaccttctaccttcggattgagccctgcattggagaactttgga
aaagaatattactatggatatgagcttgctttatctcaccaaagcaacatcgggcaagtc
aatttctctgcgcgtttaaacatgactttcacaaaaagcagggttgtagattatggcgaa
aacgaaagtgtattgcctggattacgtcaggaaggccgccctgtaggcgccgcaagaatc
ctgaaagcagatggtattttcagagaccagcaggatgtagacaactggccaaaatacctg
accagccctggagctacaccagtaagcggtaaacctggagacatcaggtatgtggattta
aacggtgatggtgtagtagaattgttcagcggcagtgccgatcgtgatgtggaaaccaaa
tacatcgttccaccaacagtttacggtttatcattggcctttaaatggaaaaacttctct
gctgatgccttattccaggcttctacaggggtttacatcaactatgcaccggctgccgat
ttaaccaacttctacgaattacatttagacagatggacaccggaacaaaccgatgcggct
tacccaagactattgtcgaactatgaagccaacagatatccttctactttttatgttaaa
aacggaaactatatcaagctgagaaccgcacaattgtcttatagcattccaaaaacggta
ttgagacagattggtgtttcttccttgacgctgactgcacaagggcaaaacctgttcacg
atcagtaacaacaagaggttcgaccctgagtcgtccggcacctttgccaactcttaccct
ccacaacggattttctcttttggtcttcgtttaggcctttaa
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