Pedobacter gandavensis: QG516_07240
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Entry
QG516_07240 CDS
T09013
Name
(GenBank) PAS domain S-box protein
Organism
pgj
Pedobacter gandavensis
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_9
HATPase_c
PAS
PAS_8
CHASE
PAS_4
HATPase_c_2
PAS_11
Motif
Other DBs
NCBI-ProteinID:
WGQ11447
LinkDB
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Position
complement(1749946..1752303)
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AA seq
785 aa
AA seq
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MNLEKKLSSSTNILFKKPKITGAVISLLLISLILYVSNQRYQMVKDDQRMEMNRVLEVVR
YNVDQSLKNSYTAALTLGLTINTDGVPKNFEAVAAQLINSNPNLQAVEMVPDGIIKYIYP
LKGNEAALNLNILKFSKEISEEAKKAIADRKMYFAGPLKLKQGGLGIVGRMPLFFNNKFW
GFSAVVIKLDTFLKEAGVKGVADNRYAFQLSKVNPVTGKEEFFMPKIKTTADAVEESVTF
SDGNWKLYMRSIPSYKPYLKIIFPTIFAVFLAGLSGFLVSMVFKRPAELERLVHEQADKL
LENELKFKTIFDQAAIGIMEIDSNTGALLHVNSRLCKILGYSAEELVMKHFHTLSHPDDL
DSGLNHFERMESGEISEFELLKRYLHKDGTVVWANLMITPLWLPGTKPTSHIAIVEDVTA
RMEAERIAVEYRQRIESLINTIDGIVWEANPFTFEFAFISEKSKDILGYTSEEWLASPTF
WVDHIHPDDRQYRLHYCYSFADKLEQHDFEYRMIAKDGSIVWLRDIVNVVTSDGKVVMLR
GIMIDITKNKQAERDLNHSFDLVNEQNKRLLNFSYIVSHNLRSHTSNIQSISALIESATS
NEERNEMVALLKTVSNSLNETLLNLNKVVNIQTNINVIVEPLVLYEYINRTLSVLHDQIV
LKKACILNQVPQTVLVNYNPAYLESILLNFIFNAIRYSHPERPPLIELTCQQEGQVVLKI
KDNGIGMDLEKHGAELFGMYKTFNGNADSRGVGLFISKNQIDAMGGKVTVSSEFGTGTTF
EIYFK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagagaaaaaactatcttccagtaccaatatcttatttaaaaaacccaaaatt
accggtgcggtaatttccttgctactgatctctttgatcctctatgtatctaatcaacga
tatcagatggttaaagacgaccagaggatggagatgaaccgtgttctagaggtggtgagg
tacaacgtagatcagtcgctcaaaaacagctatactgcagctttgacgctgggtttaacg
atcaacacagatggagtacctaagaatttcgaagccgttgccgcacagctgatcaattct
aatcccaatttacaggcagtagagatggtgccagatgggatcattaaatacatttatcct
ttaaaagggaatgaagcagcgctcaatctcaatattcttaaattctctaaagaaattagc
gaagaagccaagaaagctatagcggatcgaaagatgtattttgctggtcctttaaagctc
aaacaaggaggattggggattgttggacgaatgcctttgttttttaacaacaagttttgg
ggattttctgctgtcgtaattaagctggatacctttttaaaggaggcaggagtaaagggc
gtagctgataatcgctatgcctttcagctgtcgaaggttaatccggtaactggtaaagaa
gagttctttatgccgaaaattaaaactacagctgatgcagtggaggaaagtgtcactttt
tctgatggcaactggaaattgtatatgaggagcattccaagctacaaaccttacctgaaa
atcatattccccactatattcgctgtttttcttgccggacttagtggttttcttgtctcc
atggtatttaaaagacctgctgaattggaacggctggtacacgaacaggccgataaatta
ctggaaaatgaactaaaattcaaaacgatatttgatcaggcagcgattggaattatggag
attgattctaatacgggtgccttacttcatgtcaattcaaggctctgtaaaatccttgga
tattcagctgaagaattagtaatgaagcattttcataccctgagtcaccctgatgatctg
gacagcggcctcaaccattttgagcgaatggaaagcggtgaaatctctgaatttgaactg
ctgaaaaggtatttacataaagatggaacagtggtttgggcaaacctgatgatcacacca
ttatggctgccgggaacaaaaccaactagtcatattgcaattgtagaagatgtgacggca
agaatggaggctgagcgcattgcggttgagtacaggcagcgcatcgaatcgctgatcaat
accattgatggaatcgtttgggaagccaatccttttacctttgaattcgcttttatcagt
gaaaagtcgaaagatattttgggctatacgagtgaggagtggctggcttcgccaaccttc
tgggtagaccatatccatccggacgacaggcaataccgcctccattattgttattccttt
gcggataaactggagcagcatgattttgaataccgtatgatcgccaaagatggtagtatt
gtctggttgagagacattgtgaatgtggtgacctccgatggaaaggtggtgatgctgagg
ggaattatgattgacatcaccaagaataaacaagcggagagagatttaaaccactctttt
gacctggtcaatgagcagaataaaaggttgctgaatttctcttatatcgtgtctcataac
ctccgttctcataccagcaacattcaatctatttctgccttgattgaatcagcgacctct
aatgaagagagaaatgaaatggtcgctttattgaaaacagtgtcgaattctttgaatgaa
acattactgaatttaaataaggtcgtcaatattcaaacaaacatcaatgtcattgtagaa
cctttagtgctttatgaatacatcaataggacgctgagtgtactgcacgatcagattgtg
ctgaaaaaagcctgtatcctgaatcaagtaccgcaaacggtattggtgaattataaccct
gcttatctggaaagtattttgctcaatttcatttttaatgccattagatacagccacccg
gaacggccacctctaattgagctgacttgtcagcaggaggggcaagtggtactgaaaatc
aaagataatgggattggaatggacctggaaaagcatggtgcggagttgttcggaatgtat
aaaacctttaatggaaatgcagattcaagaggagtggggctatttatctctaaaaaccag
atcgatgccatgggaggaaaggtgacggtaagcagtgagtttggtacgggaacgaccttt
gaaatttacttcaaatag
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