Pedobacter gandavensis: QG516_19925
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Entry
QG516_19925 CDS
T09013
Name
(GenBank) TonB-dependent receptor
Organism
pgj
Pedobacter gandavensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
TonB_dep_Rec
CooC_C
Big_1
MG4
Dioxygenase_C
Dockerin_1
DUF6795
Motif
Other DBs
NCBI-ProteinID:
WGQ08783
LinkDB
All DBs
Position
4740677..4743727
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AA seq
1016 aa
AA seq
DB search
MRKIILLCLILCLGTIAFAQQITVTGKVTDQDGGPVPNATVTETANPKNGTFTNNNGTFS
IKINSKQVTVSMIGYVPQTIAIGNSHRINVKLEENNSQMNEVVVVGYGKQKKINSSGAIS
TISGKELRQSPAASLQNSLAGRLPGLFQQQTSGQPGKDAANIYIRGISSFAGNTNRPLVI
VDDVEFQYDQLNQLDPNEVESLSILKDAATTAIYGIKGANGVIVITTRRGKEGPAVITFR
TEAGLQMPTILRKSLDSYQSLQLLKEQAINAGQDPNVAYPGLVSDEALEHFRLGDDPFRY
PNVNWYDEVMKKSALQQRNNIDINGGTSTLRYFISAGSIFQNGILKELSRKEDFDNNYYL
KRYNIRSNVDLDVNKNLSLKLDLSTRFSEINEPNLPDPMAGGALPFWRRISSGLLGPWVY
PVKNADGSYGGIKAGSLNPVGALEYGGYKRNYSNDLNLNLSADHKLNFLTEGLAVKGVVA
YTNKSGFARELTRGRFPVYSLVPGSDVLDPVYPELLRIEPLVKASSYTVPFRRVNFQGIL
NYNRKFGSHNVYGLVLTNRTLDIEGANAPAKFQGYAGRAGYDFKSRYLVEFNAGYNGSDR
FKSKNRYGFFPAISGGWNISEEPFFKKHVKVINYLKIRGSYGTVGSDEVEGNRYLYEEIY
TVAADGYYFGESPTGQPKVTPGTLANLDVRWEKEHKMNIGMDMKLFDSKLEITADYFDHL
RYDILTKRETVPAYSGLTLPPVNLGRVSNKGFELEVNHRNAVNDHFMYFIRANASFARNK
ILFRDEPDGVAPNLKKTGRPVGQLFGYVSQGFYYDEADIANSPKVLGKTVKPGDLKYEDV
NGDGIIDGNDITAIGKPEVPELTYGFSAGFTFKDFDFSFLLQGASRSSVSSNTLLQIGNV
NGIPAAIHLKRWTPENRDNAEYPRLGGVSFDASTFWLRPADYLRLKNVELGYHLPKPFTQ
RLKLKDIRFYANGLNLLTFNKLKIYDVDPESKRGSVEAYQNYPQMKIINFGLQVTF
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaataattcttttatgcctgatactttgcctgggcacgatagcctttgcacag
cagatcacagtgacgggaaaggtgactgatcaggatggcggcccggttcctaatgcaacg
gtcacagaaacagcaaaccctaaaaacggtacttttaccaataataacggtactttcagt
ataaaaattaacagcaaacaagttacggtcagcatgatcggctatgtgccgcaaacgatc
gcgataggaaacagccaccgcatcaatgtaaaactagaggaaaacaattcccagatgaat
gaggtggtggtagttggttatggtaaacaaaagaagatcaacagcagtggtgccatctct
acgattagtggaaaggaattgcgccaaagtccggcggcaagtctccagaactccctggcc
ggtagattgcctggtttatttcagcagcagaccagcggacagccaggtaaggatgcggcg
aatatctacatcagaggaatcagttcttttgccgggaataccaacagaccactggtcatt
gtggatgatgtggaatttcaatatgatcagctcaatcagctggatccaaatgaagtagaa
agtctttctattttaaaagatgcagcaacgacggcaatttatggaattaaaggagcaaat
ggagtcattgtgatcaccacacgaagggggaaagaaggacctgcagtaattacttttcgt
actgaagcaggcttacagatgcctaccatcctgaggaaatcactcgattcttaccagtcc
ctgcaattgttaaaagaacaggccatcaatgcaggtcaggatccgaatgtcgcttatcct
ggtttggtgagcgatgaagcattagaacatttccgtcttggtgatgatccttttcgttat
ccaaatgtgaattggtatgatgaggtgatgaaaaaatcagccctgcagcaacgcaataat
attgacatcaatggaggtaccagcacgcttcgctattttatttctgcaggttccatcttt
caaaatgggatcctgaaagagctgagcagaaaagaggattttgataacaattactacttg
aaacgctataacatccgctctaacgtggatttagacgtgaataaaaacttaagtctgaag
ttagacctttctacacgtttcagtgaaatcaacgagcccaatctgccagatccaatggca
ggtggtgccttacctttctggcgcaggatttccagtggattacttggtccttgggtatat
ccggttaaaaatgccgatggcagttatggcggtataaaagcaggatcattaaacccggtg
ggggctctggaatatggtggttataaaagaaattatagcaacgacctgaacctgaattta
agtgcagaccataagctgaacttcctgacggaaggtttggctgtaaaaggggtggtggcc
tataccaataaatctggatttgcgagagagctgaccaggggtcgttttccggtatattct
ttggttcccggatccgatgtgttagatccggtgtatcctgaactactgcgaattgagcct
ttggtgaaagccagttcttatactgttcccttcagacgtgtgaatttccagggaattctg
aactacaacaggaaattcggtagtcataatgtatatggtttggtcctcaccaatcgtacc
cttgacattgaaggcgcaaatgctcctgcaaaattccagggctatgctggaagagcaggt
tatgatttcaaatcacgctatttagtagagtttaatgcaggatataacggttccgatcgc
tttaaatctaaaaataggtacggattcttcccggcaatctccggcggatggaacatcagt
gaagagcctttctttaagaaacatgtaaaagtaatcaattacctaaaaatcagaggttct
tacggtaccgtaggaagtgatgaggtagaaggaaacagatacttatatgaagaaatatat
acagtggcagctgatggttattatttcggggaaagtcctaccgggcaacccaaagtaact
cctggaacgctcgctaatttagatgtgcgctgggaaaaggaacacaagatgaatattggt
atggacatgaagctgttcgatagcaagctggagattacagccgactattttgatcacttg
cgttatgatatcctgaccaaaagggaaactgttcctgcctattctggattaacacttcct
ccggtaaatctgggtagggtgagtaataaagggtttgagctggaagttaatcaccgaaat
gctgttaatgatcattttatgtacttcatccgtgccaatgcttctttcgccagaaataag
attcttttccgcgatgaaccggatggtgtggcgccaaatttaaagaaaaccggacgtccg
gtggggcagctgtttggctatgtttcccagggtttctattatgatgaggcagatatcgcc
aatagcccgaaagtactcgggaaaactgtgaagccgggagatttaaaatatgaagatgtg
aacggagatgggatcattgatggaaatgacatcaccgcgatcggtaaaccggaagtgcca
gagttaacttatggcttctctgcaggttttacttttaaagattttgacttttcattctta
ctgcaaggggcttccagaagcagcgttagctcgaatacacttttgcaaattggaaatgtg
aatgggattcctgcagcaattcacctgaaacgctggacaccagagaacagggataatgcg
gaatatccaaggttgggcggggtaagctttgatgcttccacattctggctgaggcctgcg
gattacctccgactgaaaaatgtagaactcggttaccatttacctaagccttttacacag
cgtttaaagttgaaagacatcaggttttatgccaacgggttaaatctgctgacctttaat
aagctgaaaatctatgatgtagatcctgaatcgaaacgtggaagtgtagaagcttatcaa
aattatcctcagatgaagatcatcaattttggtttacaagtaacattttaa
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