Pedobacter gandavensis: QG516_23560
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Entry
QG516_23560 CDS
T09013
Symbol
hemN
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00860
Porphyrin metabolism
pgj01100
Metabolic pathways
pgj01110
Biosynthesis of secondary metabolites
pgj01240
Biosynthesis of cofactors
Module
pgj_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
QG516_23560 (hemN)
Enzymes [BR:
pgj01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
QG516_23560 (hemN)
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
WGQ09494
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Position
5575943..5577301
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AA seq
452 aa
AA seq
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MNHLISKYHVAAPRYTSYPTVPYWKTTDFTVKDWEKAVAQSFRESNDKEGISIYIHLPFC
ESLCTYCGCNTRITKNHKVESPYIEALLKEWQLYLNLFETRPLIKELHLGGGTPTFFSAE
NLKLLMEGILKYADLHEAAEFSFEAHPGNTTDEHLITLNQLGFRRLSLGIQDFDPHVQLV
INRVQTYEEVEQVTLKARALGYTSINYDLIYGLPHQQIQGLSDTLDSVLQLKPDRIAFYS
YAHVPWVKPGQRRYTELDLPSQRLKQELYELGCKKLKEGGYLDVGMDHFTLVTDSLYEAE
IKGKLHRNFMGYTHQYSQLMIGLGVSSISDTWTAFAQNVKTVEEYLTIVNEGKLPVVKGH
LLNAEDRITRQHILNIMCKGHTSWTEEEANSPEFSEGLQRMRWLALDGLVFLSADHLRVT
PLGKRFLRNICMALDYRYWADQPKTELFSLTG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatctgatctccaaatatcatgttgctgcccctcgttataccagctatcctacc
gttccttattggaaaacaacagattttaccgtaaaggactgggagaaagccgttgctcaa
tcctttagggaaagtaacgacaaagaagggatcagcatttacatccaccttcctttttgt
gaaagtttatgtacttactgtggctgtaataccaggatcactaaaaatcataaagtagag
tcgccttatatcgaagctttactgaaagaatggcaattgtacctgaatctatttgaaacc
cgtccattaattaaggaattgcatttgggcggtggcacacctacttttttcagtgcagag
aatttaaaactgctgatggaaggcatcctaaaatatgccgacctgcatgaggccgctgaa
tttagcttcgaagcacatcctggaaatacgaccgacgaacatttgatcactttgaaccag
ttaggtttcagaagattaagtttagggattcaggattttgatccgcatgtgcagctggtg
atcaatagggtgcaaacctatgaagaagtagagcaagtgaccttaaaagcaagggcttta
ggctatacctcgatcaattacgacctgatttacggtctccctcaccaacagattcagggg
ctttcagatacactggattcagtactgcaattgaaaccagaccggattgctttttacagc
tatgcccatgttccatgggttaaaccagggcaaagaaggtacacagaactggatcttcct
tctcaaagattaaagcaggaactgtatgagctgggttgtaaaaagctaaaagaaggagga
tacctggatgtgggaatggaccactttacattggttacagacagtttgtatgaggcagaa
attaaaggaaaactgcaccggaactttatgggctatacccatcaatacagtcagttgatg
attggtttaggtgtatcttctataagtgatacctggaccgcatttgcacagaatgtgaaa
acggtggaagagtatttaacgatagtgaatgaaggtaaattacctgtggtaaagggccat
ttactgaatgcagaagataggattacccgtcagcatattttgaatatcatgtgtaaagga
catacttcctggacagaggaggaagccaattctcctgagttttctgaaggtttacagcgc
atgcgctggctggcactggatggattggtgttcttgtcggcagatcatcttcgggtaacg
ccattgggcaagcggtttttaagaaacatctgcatggcgctggattatagatactgggca
gatcaaccaaaaacggaacttttcagccttaccggataa
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