Pedobacter gandavensis: QG516_25140
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Entry
QG516_25140 CDS
T09013
Name
(GenBank) polysaccharide lyase 6 family protein
KO
K01729
poly(beta-D-mannuronate) lyase [EC:
4.2.2.3
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00051
Fructose and mannose metabolism
pgj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
QG516_25140
Enzymes [BR:
pgj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.3 mannuronate-specific alginate lyase
QG516_25140
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chondroitinas_B
NosD
Motif
Other DBs
NCBI-ProteinID:
WGQ09802
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Position
complement(5931708..5934011)
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AA seq
767 aa
AA seq
DB search
MMRKFLFLSLMFYAMNSCAGIIVDNAEQLRKAVQKAKPGDTIVLKNGTWKDAALNLDGKG
TAQKPIVIMAESPGGVLLTGSSYLQLAGEYLTVKNLHFNQGFTPKRAVISFRADSKNLAN
HCRVTGVVIENYSQPERFKTDTWVIFYGKNNRIDHSTFVDKLNSGPVIIVELDDERSQQN
YHRIDSNYFNGRPRFGSNGAETIRVGVSRYSLTPSRTTISHNFFERCNGEVEIISIKSGE
NKVSFNTFFESEGGMVLRHGSNNTVESNFFNGNNKPFTGGVRIINPGHKVFNNVFFQLKG
KQFRAPLSIMNGVPNSLINRYYQVKDVTVEKNTFVDCTPFLFGAGKDAERTLSPQEVAFR
NNLVLSKDSSIYENLNDDNGIKITDNGLIEGANLRGKNTENPPAGFHKIKPKYLRIKGYE
LPYDAKYGADLKQLSFIEAKNTGAVWFQPAVKTTARKAKSFQLRSAQSENFKQLSLQALS
GDTIVLMDTGYYKMKEPIQISKALVIMAAKNLHKRPTLVNASFNSLPAFLTIENGGRLTV
KNIAFKGTLESYGGVDAGIKSSESPMNLSYYLNVDGCEFYDFNESSQSGIAGAKGTLADS
LVVSNSIFHHLSGTGINLSSEKDDKGIYNAEFVNITNCLFTNLLGSAINVYRGGNDESTL
GPFVSIDYCSFNEVENREQGAVVKLIGVQQAKITNSSFSNSGQGGRSIQFQEYRTDHILV
DYCNFYNSGKIESFYNNAAGPHIYYDEPGSVKLASASNEQQALGAKF
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaaattcctattcctttccctgatgttttatgcgatgaattcctgtgcggga
ataatagtcgacaatgcggaacagcttcgaaaagcagttcaaaaggcaaaacccggtgat
accattgtactgaaaaatggcacatggaaagatgctgctttaaacctcgatggcaaggga
accgcccagaaacctattgtgattatggcggaaagcccaggtggagtgctgctgacaggc
agttcttacctccaattggcaggtgaatatttgacggtaaaaaacctgcattttaaccaa
ggttttacccctaaaagagcggtaatttcttttagggcagacagtaaaaatctggccaac
cattgtcgggtgaccggcgtggtgattgaaaattatagtcagccggaacgcttcaaaaca
gatacctgggtgatattttatgggaaaaacaaccggatagatcattctacatttgtcgac
aagctgaattccggaccggtgattattgtggagctggacgatgaaagaagtcagcagaat
taccatcgcattgacagcaattatttcaacggccgaccacgtttcggctctaatggtgcc
gaaaccatccgtgtaggtgtctccaggtattccctcactccttccagaaccaccatcagc
cataatttctttgaacgctgcaatggagaagtggaaattatttccattaaatccggagaa
aacaaggtgagttttaacaccttttttgaaagcgaaggcggaatggtattaagacatggc
tcaaataacacggtagaaagcaatttcttcaatgggaacaacaaaccttttacaggtgga
gtccggatcattaaccccggtcacaaagtgttcaacaatgtattcttccagcttaaagga
aaacaattcagagcgcctttgagcatcatgaacggtgttcccaattctttaatcaaccga
tattaccaagtgaaagatgtgacagtagaaaaaaacacctttgtcgattgtacacccttt
ctctttggcgcaggaaaagatgcggaaaggacactttccccgcaggaagtggcgttcaga
aacaacctggttttaagcaaagattccagcatttatgagaatttaaatgatgataatggg
atcaaaatcaccgacaatggacttatcgaaggggccaaccttcgcggaaaaaacactgaa
aatccacctgcaggtttccataaaataaaaccaaaatacctgcgtataaaagggtatgaa
ctgccttacgatgccaaatacggagcagacctgaagcagctctcctttattgaggcgaaa
aatactggtgcagtatggtttcagccagcagtaaaaactactgcccgcaaagccaaaagt
tttcagctgaggagtgctcagtctgaaaactttaaacagctcagtctgcaggccttatcc
ggtgataccattgtattgatggacaccggttattataaaatgaaggagccaatccaaatc
agcaaagcactggtgattatggcggctaaaaacctgcataaaagacctactctcgtgaat
gcaagtttcaatagcctgcctgcgtttttgaccattgagaatggcggtcgcctgaccgtt
aaaaacatcgcatttaaaggaacactggaaagttatggaggtgtggatgcagggattaaa
tcttcggaatcccctatgaacctgtcctattatttaaatgtagatggctgtgagttttac
gatttcaatgaaagttcacagagtggcattgcaggcgcaaaagggacattagcagatagt
ttagtggtgagcaactcaattttccaccatctttctggcacaggcatcaacctttcttca
gaaaaagacgacaaaggcatttacaatgctgaatttgtgaacattaccaattgcctgttt
acaaatttattgggaagcgccatcaacgtttaccgtggaggaaatgacgaaagcacctta
gggccatttgtcagcatcgattattgcagttttaacgaagttgaaaacagagaacaaggc
gcggtggtgaaattgattggcgtacagcaggcgaaaatcaccaattccagtttctccaat
tccggacagggcggtcgttctatacagtttcaggaatatagaacggatcatattctggtt
gattattgtaatttctacaattcgggaaagattgaatctttttataataacgctgccggt
ccgcacatttactatgatgaaccgggatcagtaaaattggcgtctgcatcaaatgagcaa
caagcacttggtgcaaagttttaa
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