Phaeobacter inhibens 2.10: PGA2_c11240
Help
Entry
PGA2_c11240 CDS
T02193
Symbol
rhlE2
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGA2_c11240 (rhlE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgl03019
]
PGA2_c11240 (rhlE2)
Enzymes [BR:
pgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PGA2_c11240 (rhlE2)
Messenger RNA biogenesis [BR:
pgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PGA2_c11240 (rhlE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
AAA_19
HEM4
Helicase_RecD
SUa-2TM
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AFO87132
UniProt:
A0AA85Z2W4
LinkDB
All DBs
Position
complement(1237715..1239091)
Genome browser
AA seq
458 aa
AA seq
DB search
MGGTGRGTRLAVKGRDVTEFSTMGLPEQLLTRIAELGYTDPTPIQARAIPHALNGQDVLG
LAQTGTGKTAAFGVPLIAQMMQYGRKPAAKTVRGLVLAPTRELANQIAANLKGLTEGTPI
KTGLVVGGVSINPQISRLSRGTDILIATPGRLLDILDRGALDLGSCDFLVLDEADQMLDL
GFIHALRKIAALLPEQRQTMLFSATMPKQMNEIANSYLQSPVRIEVNPPGKAADKITQSV
HFIAKAEKLSLLKELLGAHKDERTLVFGRTKHGMEKLMKTLSAAGFSAAAIHGNKSQGQR
ERALASFKSGEVKILVATDVAARGLDIPDVKYVYNYELPNVPDAYVHRIGRTARAGKDGQ
AVAFCAPDEMGELKAIQKTMNLNIPVASGRPWEVLPDAKAPAGRRGGGKPGGGGKPGGHR
RRRSGGGGGGQGGARSGGQGAGQGGGQGKAGGQRRRAQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcaccggccgtggcacccgcctggctgtgaaaggacgagacgtgacagaattt
tcaaccatggggctgcccgaacagctcctgacccgcattgctgagctgggctacacagat
cctaccccgattcaggcacgcgcaattccgcatgcgctgaacggccaggacgtgctgggc
ctggcgcagaccggcaccggcaagaccgctgccttcggcgtgcccctgattgcccagatg
atgcaatatggccgcaagcctgccgccaagaccgtgcgcggtctggtgctggccccgaca
cgcgaactggccaaccagatcgcggccaacctcaaaggcctgaccgaaggcaccccgatc
aaaaccgggctggttgtcggcggtgtgtcgatcaacccacagatcagccgcctgtcgcgc
ggcaccgacatcctgatcgccacgccgggccgtcttctggacatcctcgaccgtggcgcg
ctggacctcggctcctgcgacttcctcgtattggacgaggcggatcagatgctggacctc
ggcttcatccacgcgctgcgcaaaatcgcggcgctgctgcccgaacagcgccagaccatg
ctgttctcggccaccatgcccaagcagatgaacgagatcgccaactcctacctgcaaagc
cccgtccggatcgaggtgaaccctcccggcaaagccgcagacaagatcacccagtcggtg
catttcatcgccaaggctgaaaaactgtcgctcctgaaggagctgctgggcgcccacaag
gatgagcgcacgctggtctttggtcgcaccaagcacggtatggaaaagctgatgaagacg
ctgtccgcagcagggttctcagcggcggcgatccacggcaacaaatcccagggccagcgc
gaacgcgcgcttgcctcgttcaaatcgggcgaggtgaagatcctcgtggccaccgatgtg
gccgcccgtggtctggacatccccgacgtgaaatacgtctacaactacgagctgcccaac
gtccccgacgcatatgtgcaccgcattggccggaccgcacgcgcgggcaaggatggtcag
gccgtggccttctgcgcgcccgatgagatgggcgaactgaaagccattcagaaaaccatg
aacctcaatatcccggtggcgtccggccgtccgtgggaggtgctgcccgatgccaaggct
ccggccgggcgtcgcggtggtggcaaacccggtggcggcggcaaacccggcggtcatcgt
cggcggcgcagtggcggcggtggcggcggccagggcggcgcgcgcagcggtggtcagggt
gcaggtcaaggtggcggacagggcaaagccggcggtcagcgccgccgcgcccagtaa
DBGET
integrated database retrieval system
