Paenibacillus graminis: PGRAT_00040
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Entry
PGRAT_00040 CDS
T03325
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pgm
Paenibacillus graminis
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgm03032
]
PGRAT_00040
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_00040
Enzymes [BR:
pgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PGRAT_00040
DNA replication proteins [BR:
pgm03032
]
Prokaryotic type
DNA Topoisomerases
PGRAT_00040
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PGRAT_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AIQ66221
UniProt:
A0A089LXF4
LinkDB
All DBs
Position
7707..10250
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AA seq
847 aa
AA seq
DB search
MAEQNNPQVKDRDIGEEMRESFMDYAMSIIVSRALPDVRDGLKPVHRRILFAMSELGMFA
DKPHKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSMRYMLVDGHGNFGSIDGDMAAA
MRYTEARLSKIAGEMLRDLNKETVDFAPNYDGEENEPVVLPARYPNLLVNGVSGIAVGMA
TNIPPHNMGEVIDGVQAMIKNPDITPMELMEYIQGPDFPTAGYILGREGIRQAYRTGRGS
VTMRAKADIEENNGKARIIVSELPYQVNKARLVEKIAELVREKRIEGITDLRDESDRNGM
RVVVEMRRDVNPSVVLNNLYKHTSMQSTFGINMLAIVNNEPKILNLRDVLYHYLQHQIEV
IRRRTIFDLKKAEARAHILEGLRIALDHLDEVIALIRASRTTDIARDGLMSTFSLSVEQA
QAILDMRMQRLTGLEREKIENEYNELLAKIAEYREILANEHLVLEIISNELQEIRDRYSD
DRRTEITVGEESILDEDLIPREEVVITITHTGYIKRLPVSTYRSQKRGGRGVMGMDTKDQ
DFVEHLFVSNSHNYLMFFTDKGKVYRIKAYEIPELGRTARGTPIINLIQIEQGEKISAVI
QVEEADSDKYLFFATREGIVKKTPLEDYNNIRKGGLIAINLREEDSLIEVKLTDGEQNLI
IGTARGMSITFSENDVRSMGRSATGVKGITLDANDHVIGMDCVDKELEVLIVTSKGYGKR
TPALDYRSQTRGGKGIKTINLTDKNGPVVGLKVVKKDEDLMIITTSGTLIRTSMDGISTM
GRYAQGVKLINIREDDAVATLCRADKSEEDEFSEQEAGEEVSGGVAEQAGDEIQSETVSD
GEEDNLE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaaaataacccgcaagtcaaagatcgggacattggtgaggaaatgcgcgaa
tcctttatggattacgcgatgagcatcattgtgagccgggctttgccggatgtgcgggac
ggacttaagcctgtccaccgacgcattttgtttgcgatgtcggaacttggaatgtttgcc
gataaacctcataagaaatcagcaagaatcgtcggtgaggttatcggtaagtatcatcct
cacggagactcggctgtttatgaaacgatggtccggatggcgcaggatttctcgatgcgg
tatatgctcgtcgatggtcacgggaactttggctctattgacggcgacatggctgcagcc
atgcggtataccgaagcccggctttccaaaattgccggagaaatgctacgcgatctgaat
aaagagaccgttgatttcgcacccaactatgatggtgaagagaatgagcccgtagtatta
cctgcccgttatccgaacctgcttgttaacggggtatctggtatcgctgttggtatggct
accaatattcctcctcataacatgggagaggttattgacggtgtgcaggcgatgatcaaa
aatcccgacattacacccatggaactcatggaatatattcaaggcccggactttccaacg
gctggttacattttaggccgtgagggcatccgccaagcttaccgtactggccgcggatcg
gtaactatgcgagccaaagcggatatcgaagaaaataacggcaaagcgcggattattgta
agcgagctgccttaccaggtcaacaaagccagattggttgagaagatcgcggaattagtg
cgtgagaaacggattgaaggcattacagatcttcgggatgaatcggaccgcaatggtatg
cgtgtagtcgttgaaatgagacgtgatgtgaacccgagcgtggtgctgaataatctttac
aagcatacctcgatgcagtccacatttggtatcaacatgcttgccatcgttaataacgaa
ccgaagattcttaatctccgggatgtgctgtaccattacttgcagcatcagattgaagtt
attcggcgccggacgattttcgatctcaaaaaggctgaggcacgggcacatattctggaa
ggattgcgaatcgcactggatcatctggatgaagttattgccttgatccgagcttcccgt
acaactgatattgctcgggatggcttgatgagcaccttcagtctcagcgtagagcaggca
caagccatccttgatatgcggatgcagcgtctgaccggcttggaacgtgaaaaaattgag
aacgaatataatgagctgttggccaagattgctgagtaccgtgagattctggctaatgag
catctcgtactggagattatcagcaatgagctccaggagatccgtgacaggtattcggat
gaccgccgtacagaaatcacggttggagaagaaagcatcctggatgaggatctgattccg
cgtgaagaggttgtcatcactattacgcataccggatatattaagcgtctgccggtcagc
acctatcgcagccagaagcgcggaggccgcggcgttatggggatggataccaaagaccag
gacttcgtggaacatctctttgtgagcaactcccacaattacttgatgttctttaccgat
aagggcaaggtataccggatcaaggcttatgagattccggagcttggacggactgcgcgg
gggacaccaatcatcaatctgatccagattgaacaaggtgagaagattagtgctgtaatc
caggtggaagaggccgacagcgacaaatacctattctttgcgacccgtgaagggatcgtc
aagaagacacctctggaggattacaataatatccgcaaaggtggattgattgcaatcaat
ctccgtgaggaagactccctaatcgaagttaagctgacagatggtgagcaaaacctgatt
atcggtactgcacgcggaatgtcgattacgttctcagagaatgatgtccgttctatggga
cgcagcgcaaccggcgttaaaggtattacacttgatgccaatgaccatgttattgggatg
gattgtgtagacaaagagctggaggtactgattgtaacctccaagggttatggcaaacgt
acccctgctctggactatcgttctcagacacgtggcggtaaagggatcaagaccatcaac
cttactgacaagaatggtcctgtagttgggctgaaggtggtcaaaaaagacgaggacctc
atgatcattacaacgagcggcaccctgatccgtaccagtatggatggtatttctaccatg
ggacgttatgctcaaggggttaagctgattaacatccgtgaagatgatgctgtggctacg
ctctgcagagccgataagagtgaggaggatgaattctccgagcaagaggctggcgaggaa
gtttcaggcggagttgctgagcaggctggggatgaaatccagtctgaaacagtctctgat
ggcgaagaggataatctggagtaa
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