KEGG   Paenibacillus graminis: PGRAT_05840
Entry
PGRAT_05840       CDS       T03325                                 
Name
(GenBank) DNA repair protein
  KO
K10979  DNA end-binding protein Ku
Organism
pgm  Paenibacillus graminis
Pathway
pgm03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pgm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PGRAT_05840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgm03400]
    PGRAT_05840
DNA repair and recombination proteins [BR:pgm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     PGRAT_05840
SSDB
Motif
Pfam: Ku CDC24_OB3
Other DBs
NCBI-ProteinID: AIQ67211
UniProt: A0A089M0A5
LinkDB
Position
complement(1320202..1321173)
AA seq 323 aa
MHTVWKGAISFGLVHVPVKMFSATEDKDISLRYIHKECGSPLSYVRKCPVCDKEVAWEEI
GKGYEYEKGKFVLFDKEELDQLTEESSKSITILDFVDLTEIDPIYFQKTYYLSPDQAGAN
AYRLLMEAMRQTGKIGIAKISIRSKSSLAAIRVLADCLAIETIYYPDEVRPVSQVPGLPE
PGIVNDKELDMAKLLISQLSMPFEPGKYTDDYRQRMLDLITHKIAGEEFHIAPARQESNV
IDLMAALQASIEAVQHIPADPGPSAASATTKPKAGAVSRKKTVAAKPDKTADGVPVVDEA
TGPIPVISPKPKRRTAKSKESGA
NT seq 972 nt   +upstreamnt  +downstreamnt
atgcataccgtttggaaaggggccatcagcttcgggcttgtccatgttccggtcaaaatg
ttctccgctaccgaggacaaagacatctcgctgcgctatatccataaggagtgcggcagc
ccgctgtcgtatgtgcgcaaatgtcccgtctgcgacaaggaggtggcttgggaggaaatc
ggcaagggctacgaatatgaaaagggaaagtttgtcctttttgacaaagaagagctggac
cagctgacggaggagagcagcaagagcattaccattttggattttgtggacctgaccgag
atcgacccgatttatttccagaaaacctattacctgtccccggatcaggcgggagccaat
gcgtatcgtctgctgatggaggccatgcgccagaccggaaagatcggaattgccaaaatt
tccatccgctccaaaagcagcctcgccgccatccgcgtgctggctgactgcctggcaatt
gaaaccatctattatcccgatgaagttaggcctgtatcccaggttccaggactgccggag
cccggcatcgtaaacgacaaggagctggatatggccaagctgctgatttcacagttgtcg
atgccgtttgagccgggcaaatacaccgatgactaccgccagcgcatgcttgatctgatt
actcacaagattgccggtgaagagttccatattgctcccgcccgccaggagagcaatgta
attgacttgatggctgcgcttcaagccagtatcgaagccgtgcagcatattcctgccgat
cccggcccatctgcggcttccgccacaaccaaaccgaaagccggagcggtgtccaggaag
aaaacagtcgcggccaaacccgataaaaccgctgacggcgttcccgtcgttgacgaggct
accggaccgattccggtcatttcgcccaaaccgaaacggcgcacagccaagagtaaagaa
tcgggggcttaa

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