Paenibacillus graminis: PGRAT_10760
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Entry
PGRAT_10760 CDS
T03325
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm03030
DNA replication
pgm03430
Mismatch repair
pgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGRAT_10760
03430 Mismatch repair
PGRAT_10760
03440 Homologous recombination
PGRAT_10760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgm03032
]
PGRAT_10760
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_10760
Enzymes [BR:
pgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGRAT_10760
DNA replication proteins [BR:
pgm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PGRAT_10760
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PGRAT_10760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
AIQ68046
UniProt:
A0A089M2Q8
LinkDB
All DBs
Position
2547190..2550897
Genome browser
AA seq
1235 aa
AA seq
DB search
MSPFVHLHVHSEYSLLDGAARITDLVRRAGEYGMTTLALTDHGVMYGAIPFYKACMASGI
KPIIGCEAYLTAGSRRERGSRKDQPIYHLILLAKNETGYRNLMRLVTIGHLEGQHYKPRI
DMESLAAHAEGIICLSACLGGEVPQHLLHGREEEARKAALRYKEIFGGDFYLELQDHGIP
EQKRVNPQLIALAAECGIPLVATNDVHYLAKEDAEVQDVLICIGTGKTVDDEERLKIGTD
QLFLKSGEQMAALFPHVPEAIANTLKIAEKCNLELTFGEHILPAYSPLPEGMDAAAYLRE
LCWSGLEARYADTPRWASPDEKDAAGKRLAYELGVIESMGFSDYFLIVWDFIAFCHRQGI
VTGPGRGSSAGSLTAYCLRITDVDPLKYNLLFERFLNPERITMPDIDIDFSDERRDEVIA
YVVDKYGKQHVAQIITFGTMAARAAVRDVGRVLNLPYNEVDKAAKLIPGQLGISISRALE
GTPELKALYDGNPKIKGLLDMAMKVEGMPRHASTHAAGVVISKGPLTDAVPLQAGNESTA
LTQYSMEHLESIGLLKMDFLGLRTLSIIERSMNWITEMTGSTPDFRSIPDDDPLTYEMLG
AGETTGVFQMESAGVRRILKDMKPSGFEDIVSVVALYRPGPMEFIPKYIAGKHGQIEVEY
PHADLKQILDDTYGIIVYQEQIMQIASLMAGFSLGEADLLRRAVSKKKRETLDKERGHFV
QGSLQQGYTETDANAVYDMIVRFANYGFPRAHAAAYGVLAFQTAYLKAHYPVQFMAAMLT
AVMGTHRKVAEYVLECRRSGIGVLPPDVNESGVLFTPVPGEGTGAIRFGLAAVKNVGTLA
VENIIEVRKERPFDSLLDFCRRVDLRVCNKRVVESLLQAGAFDQLPGHRAQLLAMLDETV
DAALKWRKERDELQIQLFDDLIETPNWEIRYPDIPNFTVTQQLELERELLGLYLSGHPLD
DAAALLEEPGIQRLMDLGEAADESQTVTAGMVVSVKEITTKAGKAMAFVEWEDQIERCEV
VLFPEVWKRSRTQIVKGALLALRAKVQQEDEGFKLLAEEVAPLGADALRGLLQRRSAAAA
RAGGPGRAAPAGAAGTGASRSGAAGGAAAPASAPRAAAHAAAPAPEAARATAPRPAQGTG
GQPGQAAAEAAARDSGAADSGQRVFIKITPSAENPALLSRLQALLQRHPGPAATLLFYER
NQKLLALSDGYRIKPSEELVTAIEAMLGNGTVRIK
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgagccctttcgtgcatttgcatgtgcacagcgaatacagtttactggacggggcggcg
cgcattactgatcttgtgcgccgggccggcgaatacggcatgacgacgcttgcgcttacg
gatcatggagtgatgtacggggcaatccccttttataaagcatgcatggccagcggcatc
aagccgattatcggctgtgaagcctatttgactgcaggctcccgccgggagcggggcagc
cgcaaggatcagcccatctaccatctgatcctgctcgcgaagaatgagaccggatacagg
aatctgatgcgcctggtgaccatcggccatctggagggccagcactacaagccccggatc
gatatggaatccctggctgcgcatgccgagggtattatctgcctcagcgcctgtcttggc
ggcgaggtgccgcagcatctgcttcacgggcgggaagaagaggcacgcaaggctgcgctg
cgttataaggagatttttggcggggacttctacctggagctgcaggatcacggcattccg
gagcaaaagcgggttaatccgcagctcatcgccctcgccgccgaatgcggcatcccgctg
gtggccacgaatgatgtccattatctggccaaggaagatgccgaggtccaggatgtgctg
atctgcattggcaccggcaagacagtggatgacgaggaacgcctgaagattggcacagac
cagctgttcctcaaaagcggggagcaaatggccgcgctgttcccgcatgtgcccgaggct
atagcgaatacgctgaagattgccgagaaatgcaatctggagctgaccttcggcgagcat
atcctgcctgcctattctccgctccctgaggggatggatgcagccgcttatctccgggag
ctgtgctggagcgggctggaagcccgctatgcggatacaccccgctgggcttcgcccgac
gagaaggatgccgcagggaagcggctggcctatgagctgggcgttatcgagagcatgggg
ttcagcgattattttctgatcgtctgggacttcatcgccttctgccaccggcagggcatc
gttaccggtccgggaagaggctcctccgcaggcagcttgactgcttactgcctgcggatc
accgatgtggacccgttgaaatataatctgctctttgaacggtttctcaatcctgaacgc
atcacgatgccggatatcgacatcgatttcagtgatgaacggcgcgatgaggtcatcgcc
tatgtggtggataaatacggcaagcagcatgtagcgcagatcatcaccttcggaaccatg
gccgcgagagcggcagtgcgggacgtaggacgtgtgctgaatctgccttataacgaggtg
gacaaagcggcgaagctcatcccggggcagctcggcatcagcataagccgggcactggag
ggcactccggagctgaaggcgctgtacgacggcaatccgaagatcaaaggactgctcgac
atggcgatgaaggtcgagggcatgccccgccatgcttccacccacgcggcaggtgtcgtg
atctccaaggggcctctgaccgatgctgtgccgctgcaggcgggcaatgaaagcacggcg
ctgacccagtattccatggagcatctggagagcatcggactgctgaaaatggattttctc
ggactgcgcacgctgtccattattgaacgcagcatgaactggatcacggagatgaccggg
agcactcctgatttccgcagcattccggatgatgatccgctcacctatgaaatgctgggc
gcaggcgaaactacaggagtattccagatggagtccgcaggcgtacgccgcatccttaag
gatatgaagccttccggcttcgaggatatcgtatctgtggtggcgctgtaccgtccgggt
ccgatggaatttattcctaaatatattgcaggcaaacacggccagatcgaagtggagtat
ccccatgccgatctgaagcagattctggacgatacctatggcattatcgtctatcaggag
cagatcatgcagatcgcctcgctgatggccggtttctcgctcggtgaagcggatctgctg
cgccgggccgtctcgaagaagaagcgggagacgctggacaaggaacgcggccatttcgtg
cagggcagccttcagcagggctacaccgagacggatgccaacgctgtctatgacatgatc
gtgcggttcgccaactatggcttcccgcgcgcccatgcggcggcttatggtgtgctggct
ttccagacggcctatctcaaggcccattaccccgtccaattcatggcagccatgctgacg
gctgtgatgggcacccaccgcaaggtggcggagtatgtgctggaatgccgccgcagcggc
atcggcgtactgccgccggatgtcaatgagagcggcgtgctgttcactcctgttccgggt
gaaggcacaggagccatccgttttggactggcagcagtcaagaatgtcgggactctcgca
gtagagaacataattgaggtccgcaaggaacgcccgtttgacagcctgcttgacttctgc
cgccgcgtggatctccgtgtctgcaacaagcgggtggtggagtctctgctgcaggctggt
gccttcgaccagctgccgggccaccgcgcgcagctgcttgcgatgctggacgagacggtg
gatgccgcgctgaagtggcggaaggaacgcgatgagctgcagattcagcttttcgatgat
ctgatcgagacacccaactgggagatccgctacccggatatcccaaacttcacggttacc
cagcagctggagctggagcgcgagctgctggggctctatctgtccgggcatccgcttgac
gatgccgccgcgctgctggaggagccgggcatccagcggctcatggacctgggcgaagcg
gcggatgagagccagaccgtgaccgcgggcatggtcgtgtctgtgaaggagattacgacg
aaggccgggaaggcaatggccttcgtcgaatgggaagaccagattgagcgctgcgaggtg
gtactcttccccgaggtctggaaacgcagccgcacccagatcgtgaagggtgcgctgctg
gccctgcgcgccaaggtgcagcaggaggatgagggcttcaagctgctggccgaagaggtc
gcgccgcttggcgcggacgcgctccgcggcctgctgcagcgccgcagcgcagccgccgcc
cgggccggcggaccgggccgggctgctccagccggagccgccggcaccggcgcctcccgc
agcggcgcagccggcggagctgctgcgcctgcctctgcgccgcgcgctgctgcgcacgca
gccgcgccagcgccggaggcggcgcgggcaaccgccccgcgcccggcccagggaaccggc
ggccagcctggccaggccgccgcagaagctgctgcccgggactccggggcagcggacagc
gggcagcgtgtcttcatcaagatcacgccgtccgccgagaatccggcgctgttgtcccgc
ctgcaggcgctgctgcagcgccatcccggccctgccgccacattgctgttctatgagcgg
aaccagaagctgctggcgcttagcgacggctaccggatcaagccctcggaggaactggtc
acagccattgaggctatgctgggaaacggaacggtaagaataaaataa
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